Gene Shel_01830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01830 
Symbol 
ID8394075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp225658 
End bp226191 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID644984956 
Producthypothetical protein 
Protein accessionYP_003142603 
Protein GI257062931 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAA TCCTCGCAAC GGGGCGCGTT CGCTCCGTCA ATATCTCCAC GCGCAAAGGC 
ACGCGTAAAA CGCCTGTCGA AGAGCCGCAA ACCGTCGTCG TGCAGCACGG CATTGCCGAG
GACGCCCACG CCGGCGATTG GCACCGCCAG GTGTCGTTTC TGGCCATGGA GTCCATCGAA
CGCGCGCGTG ACCTGGGGCT CGAGGTGAAG GAAGGCGATT TCGGCGAAAA CTTCACCACC
GAAGGCATCG ACGTGATGCG CCTGCCTATG GGCACGCAGC TGCGCATCGG CAGCGACGTG
CTGGTGGAAA TCAGCCAGAT CGGCAAGGTC TGCCACACGC GCTGCGCCAT CTACTACCTG
GCGGGCGATT GCATTTTCCC GCGGGAAGGC ATTTTCGGCG TGGTGCTGGA AGGCGGCCAG
GTGCAGGTGG GCGACCCCAT CGACGTGGTG AAGATGGGCG ACGGCACCTG CGAGTTCTCG
CCGGCGGAGG CCATCGCCGA GGTGGAGGAG GCTCGCGCCA ACGGCACGCT GTAA
 
Protein sequence
MPEILATGRV RSVNISTRKG TRKTPVEEPQ TVVVQHGIAE DAHAGDWHRQ VSFLAMESIE 
RARDLGLEVK EGDFGENFTT EGIDVMRLPM GTQLRIGSDV LVEISQIGKV CHTRCAIYYL
AGDCIFPREG IFGVVLEGGQ VQVGDPIDVV KMGDGTCEFS PAEAIAEVEE ARANGTL