Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01750 |
Symbol | |
ID | 8394067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 216392 |
End bp | 217840 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644984948 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_003142595 |
Protein GI | 257062923 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.674101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCACAT CGATTCTCCC AGGTGAAGCT CCGGACCGGC CCCAGGAGGA ATGCGCTGTA TTCGGAGTGT TCTCACCTAC CGACGACGTG GCGCGCCTGA CCTGTTTCGG CCTGCAAGCG CTGCAGCACC GCGGCCAGGA GAGCGCCGGC ATCGCCGTCG GCGACGGTGA GACGGTCACG GTGATGAAAG ATCTCGGCCT GGTCACCCAG ATTTTCGACG AAGGTTCCTT GGCGGCGCTG CAGGGCGACG TGGCCGTGGG ACATTGCCGT TACGCCACCA GCGGCATTAG CGACGCATGG TTTTCGGCCC AGCCCCACAT GTCCGCCATC GACGAGGTCA TGGTGGCGCT GGCCCACAAC GGCACGCTGG TCGACACCGA ACCCATCCGC GAGCGTCTGG AGGCCCGGGG CGTGGAGTTC CGTGCCGGCA CCGACTCCGA GGTGGCCTGT CAAGCCATCG GCTACTACAC CCGCGAGACC CACCATCTGA CCGAGGGCAT CAAGCAGACC ATGGAGCTTA TCAAGGGCGC CTACGCCATG GTGCTTGCCA GCCCCACGGC CTTGTACGCG TTCCGCGACC CGAACGGCAT CCGCCCGCTG TGCCTGGGCA AACTGCCCGG CGACCGCGGC TGGGTGGTTT CTTCCGAAAC CTGCGGCTTG GACATCGTGG GCGCCGAATT CGTTCGGGAC GTGAACCCCG GCGAGATCAT CCGCATTAAC AGCACGGGAA TTTCCACCTT GCAGGCTCTT GAGCCCGGTC CGTCGCGAGG CTGCATCTTC GAGTACGTAT ACTTCGCCCG CCCCGACAGC GTGATTGACG GGCAAAGCGT CTACCAGGCA CGACGCGCCA TGGGCCGCAT TCTGGCCGAA GAGGCCCCAG CTCAGGCCGA CCTGGTGCTG GGCGTGCCCG ACTCCGGCGT GCCCGGAGCG CTGGGTTTCG CCGAAGCGAG CGGCATCGAA TACACCGACG GCATCGTCAA GAACCGCTAT GTGGGGCGCA CCTTCATCCA GCCGACCCAG GAAATGCGCC AGCTGGGCGT GCGCATCAAA CTGAATCCGC TGCCTTCGGT TATTTCCGGC AAACGCCTGG TGGTGGTCGA CGACAGCATC GTGCGCGGCA CCACTTCCAA AAAGCTGGTG GAGATGCTGC GCGCCGCCGG AGCCGCCGAA GTGCACCTGC GCATCGTGTC GCCTCCCACC GCCTGGCCCT GCTTCTACGG CGTTGACACC CCCACCCAGG GTCAGCTCAT TGCGGCGGTC AAATCCAACC AGGAGATGTG CGAATACATC GGGTGCGATT CGCTGGCGTT CATCAGCATT GACGGACTGC GGCGCGCCGT TGGCGGTGCA AATCATGAAA CGTTCTGTGA AGCTTGCTTC ACGGGCGATT ATATTGTTCC CCTGCCAGAA TCACTAACGG ATATAGCGTT TATCAAGAAG GAGAAGTGA
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Protein sequence | MATSILPGEA PDRPQEECAV FGVFSPTDDV ARLTCFGLQA LQHRGQESAG IAVGDGETVT VMKDLGLVTQ IFDEGSLAAL QGDVAVGHCR YATSGISDAW FSAQPHMSAI DEVMVALAHN GTLVDTEPIR ERLEARGVEF RAGTDSEVAC QAIGYYTRET HHLTEGIKQT MELIKGAYAM VLASPTALYA FRDPNGIRPL CLGKLPGDRG WVVSSETCGL DIVGAEFVRD VNPGEIIRIN STGISTLQAL EPGPSRGCIF EYVYFARPDS VIDGQSVYQA RRAMGRILAE EAPAQADLVL GVPDSGVPGA LGFAEASGIE YTDGIVKNRY VGRTFIQPTQ EMRQLGVRIK LNPLPSVISG KRLVVVDDSI VRGTTSKKLV EMLRAAGAAE VHLRIVSPPT AWPCFYGVDT PTQGQLIAAV KSNQEMCEYI GCDSLAFISI DGLRRAVGGA NHETFCEACF TGDYIVPLPE SLTDIAFIKK EK
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