Gene Shel_01570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01570 
Symbol 
ID8396745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp195263 
End bp195580 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content53% 
IMG OID644984930 
ProductTrpR-related protein YerC/YecD 
Protein accessionYP_003142577 
Protein GI257062905 
COG category[S] Function unknown 
COG ID[COG4496] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02531] TrpR-related protein YerC/YecD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.144549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.996095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC TCCGGACGCA GGAAGTCGAA ATGCTGCTTG AGGTCCTGTC GGCAATGGAC 
GACAAAGACC AACTGTATGC GTTAATCGAG GACCTGTTCA CCATCCGCGA AATCAAAGAG
ACTTCGCAGA GGCTTTCAGT GGCGCAATTG CTCAGCCAAG GAAAACCCTA CACTGCCATT
GCGGAAATCA CCGGCGCTTC CGCTACTACT ATTGCACGCG TATCAAAGGC GCTCAACTAC
GGGAGCGGAG GATATCGGCT TGCCTTGGAT GTTCTGAATG GAAAAGGTTC ACAAGGAGAC
GAGCCTGACG CAGAATAG
 
Protein sequence
MSNLRTQEVE MLLEVLSAMD DKDQLYALIE DLFTIREIKE TSQRLSVAQL LSQGKPYTAI 
AEITGASATT IARVSKALNY GSGGYRLALD VLNGKGSQGD EPDAE