| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01330 |
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| Symbol | |
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| ID | 8394025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 166583 |
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| End bp | 168160 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644984906 |
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| Product | Na+/proline symporter |
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| Protein accession | YP_003142556 |
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| Protein GI | 257062884 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAA AAGTTCTGAT GGTCCTGATC TTCATCGGCA TCGTCATCGG TGTCGGCGTC
TCGACCCGAC AAAAAGACTC CAACGTCGCC GGCTTCGTCC TGGGCGGCCG CAACGTCGGC
CCCTGGCTCT CTGCGTTCGG ATACGGCACC TCTTACTTCT CGGCCGTCAT CTTCGTCGGC
TACGCCGGAC AGTTCGGCTG GAAATACGGC CTGGCCGCAA CCTGGATCGG CCTGGGCAAC
GCGCTCATCG GCAGCCTCAT GGCCTGGTGG ATCCTGGGTC CCCGCACCCG CGAGATGACG
CAGCGCCTCC AGGCAACCAC GATGCCCGAG TTCTTCGGCA AGCGTTACTC CAGCAAAAGC
CTGCGCATCG CGTCGGCCGC CATCATCTTC ATCTTCCTGA TCCCCTACAC CGCCAGCGTC
TACAACGGCC TGTCTCGCCT GTTCGGCATG GCCTTCGGCA TCCCCTACGA GGTCTGCGTC
ATCGCCATGG CTGTCGTGAC CTGCATCTAC GTGGTACTTG GCGGCTACAT GGCCACCGTG
GTCAACGACT TCCTGCAGGG CATCATCATG CTTGTCGGCA TCGTCGCCGT CATCGGTGCC
GTGCTTGCCA GCAACGGCGG CTTCATGGAG GCCCAGATTG CCCTTTCGCA GGTCCCCGCA
CAGGGAAGCG ACCTGCAAGG CGCCTTCGTC AGCTTCTTCG GACCCGACCC GGTTGGCCTG
CTGTCGGTCA TCATCCTGAC CAGCCTGGGC ACCTGGGGCC TGCCGCAGAT GATCACCAAG
TTCTACGCCA TCAAGTCCGG CCCCGCCATC AAGCAGGGCG CCATCATCTC CACCCTGTTC
GCGCTGGTCG TCGCCGGTGG CAGCTACTTC CTGGGCGGCT TCGGCGAGCT GTACGCAGAC
CAGATCGCCT ACGCCGAGAA CGGCACGCCG ATCTTCGACT CCATCATCCC CACGATGCTT
TCCAGCCTGC CTGAGCTGCT CGTCGGCCTG GTCGTGGTCC TGGTCCTGTC CGCCTCCATG
TCCACGCTGA GCTCCCTGGT GCTCACCTCT TCGTCCACCC TCACCCTTGA CCTGGTGGAA
GACAACCTGG TCAAGGACAT GAACGAGAAG CAGCGCGTGC TGTGGATCCG CGGCCTGCTC
GTGGTGTTCG TGGTCATCTC CGCCGGCATC GCCCTGGTGC AGTACCACAG CTCCATCACG
TTCATCGCGC AGCTCATGGG CATCAGCTGG GGCGCGCTGG CCGGCTCCTT CCTCGGTCCC
TTCCTGTGGG GTCTGTACAG CAAGCGCATC AGCAAGGCCT CCGTGCGGAT CAGCTTCATC
CTGGGCGTGG GCCTCACCAC CACCAACATG ATCGTTCCGT TCCTGAGCAG CCCCATCGTG
GCCGGCGCCT TGGCCATGAT CCTGAGCCTG ATCGTCGTTC CTGTGGTAAG CTTGTTCACG
CCTGCAGCGC CCATCCCGGC TGTCATCGAC CCGATCGTCA AGCCCAGCCC CTTGTCGGCC
ACCGACCGCG AGCTGGCTGC GGAAGCTGCG GCTGAGAAGC TTCACGAACT CGATCCGAAG
GAAGTCGATC CGCTGTAA
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| Protein sequence | MIAKVLMVLI FIGIVIGVGV STRQKDSNVA GFVLGGRNVG PWLSAFGYGT SYFSAVIFVG
YAGQFGWKYG LAATWIGLGN ALIGSLMAWW ILGPRTREMT QRLQATTMPE FFGKRYSSKS
LRIASAAIIF IFLIPYTASV YNGLSRLFGM AFGIPYEVCV IAMAVVTCIY VVLGGYMATV
VNDFLQGIIM LVGIVAVIGA VLASNGGFME AQIALSQVPA QGSDLQGAFV SFFGPDPVGL
LSVIILTSLG TWGLPQMITK FYAIKSGPAI KQGAIISTLF ALVVAGGSYF LGGFGELYAD
QIAYAENGTP IFDSIIPTML SSLPELLVGL VVVLVLSASM STLSSLVLTS SSTLTLDLVE
DNLVKDMNEK QRVLWIRGLL VVFVVISAGI ALVQYHSSIT FIAQLMGISW GALAGSFLGP
FLWGLYSKRI SKASVRISFI LGVGLTTTNM IVPFLSSPIV AGALAMILSL IVVPVVSLFT
PAAPIPAVID PIVKPSPLSA TDRELAAEAA AEKLHELDPK EVDPL
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