Gene Shel_01240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01240 
Symbol 
ID8394016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp158337 
End bp158771 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID644984897 
Productuniversal stress protein UspA-like protein 
Protein accessionYP_003142547 
Protein GI257062875 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACA AGAATCTGCT CGTTCCTTTC GACGGCTCCG AACATGCGGT AAACGCCCTG 
GAGGCCGCCA TCGACTTGGC TGACGGCGTC GAAGGCGTGA CCGTGCATGT GCTGCGCGTG
GCCGAAGCCG CCGGCGCTGA ATCCGGCCTG AGCGATTACG ACGGTTTCGA GGTGTACCTG
AACAGGCGCG TGAACGCCGC CAAGGAGGCC ATGCTCGCCG AGCTGGCGCA GGCCAACATT
TCCACGGACG GGCTGGTCGT CGCGGTGGAG CCGTCGTATT CCCCCACCGA GGGCATCATC
TGCTATGCCG AGGATCACAA CGTTGACCTG ATTGTCATGG GCCGCCGCGG CGTGGGAGCG
CTTCGCGGCA TGCTGGGTAG CGTGAGCTAC GGCATCCTGC ACAACGTGGA CATTCCCGTT
ATGACTGTGA AATAG
 
Protein sequence
MKYKNLLVPF DGSEHAVNAL EAAIDLADGV EGVTVHVLRV AEAAGAESGL SDYDGFEVYL 
NRRVNAAKEA MLAELAQANI STDGLVVAVE PSYSPTEGII CYAEDHNVDL IVMGRRGVGA
LRGMLGSVSY GILHNVDIPV MTVK