| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01220 |
|---|
| Symbol | |
|---|
| ID | 8394014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 155430 |
|---|
| End bp | 156728 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644984895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142545 |
|---|
| Protein GI | 257062873 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTGTC CCCATTGCGG AGCCACGTTG CCTGACGGGT CGCAGTTCTG CGGCTCCTGC
GGCAAGCGCT TGAACGTTAC CGCCACTCCG GCCGCCATGC CTGCGCCCAA GAAGAAGACG
CCCATCGTGC CCATTCTCGC CGGAGTGCTG GGTGCGGTCA TCGTCATCGG CGTCGGCGTG
TTCGCATACC AGAACTTCTT CGCGGGCATT GCCATCAACG AGGAGAACTT CCCCGACAAG
GCGGTCATCA AGTTCGTCGA GAAGCAGGAC GAGAACGACA ACGGCAGGCT GACCTCCAAA
GAGGCGGGGG CCGTCACCAA GATCGACCTG TCCCGCGACG TCGACAGCGA CGACACCCCC
GCGACCGACC TGACAGGTCT GGACGTGTTC GTCAACGCGA AACGGATTGA CGTCTCCGGC
AACGAGCTGG AAGGCACCGT CGATTTCAGC GGGTTCGCGC ATCTGACCAA GGTGGATGTG
TCCGATAACA CGGGCGACCT GGAACTGGTG CTTCCCGACG GGTTCGACGA GGCCGACCTG
GAGACGGGCG ATTCGTCGAT CACCTACACC ATCGGCGACA AGACGGTCCG CAAAATCGCG
TGCTCGTATG TGACCGAATA CGTCGACATT TCCGACAAGA CCGACTACGA GGACTCGTGG
TACACGGCGT TCACCTACCC CGTGCTGAGC TGCGACGCTT ACAGCAAGCA CATCGACCAG
CTGAACGAAG AGAACCGGGT GGCGGTGCAG GAGGCTGCAG AGCGGTATCT GACCGATGAC
GTGCATATAA ACGGCGACGA CGGCCTTTAT TACCTGAACA GCAACATTTA CGTCGGTCAT
CTGGATGAGC GGGCGGGCGT CGTCAGCTTT GTGACGGACG TATACGAAAT AGGCGCTCGA
TCCGCACACG GCATGACCTA CCGATCGGGC CGCATCGTAG ATTTGAGCAC GGGCGAGGAA
CTGACCGCCG CCGAGTATTT GGGGATTTCC CAAGACGAAC TCGACAGCAT GACCCAGGAG
GCCTGCCGCA CGTTCGTCAG CCTGTACGGC TCCGACATCT ATGAGCCTGA AATCGCCCTG
GACAACTTCT TTAGCCTGAT CAGGGACGGG TCGATACCGT ACCTGCTGCT TGACGAAGGC
GTCGTGGCGT TCGCGCCCGA CTATGCCCTG GGCTCCTACG CATACGGCAA CCACCTGATC
ATGGTCGCGC CCTCCGCCGA CAGCACCTAC GCCGCCGGCG ACGAGATCTT CCTGGAGTGC
CCCGACGAAA ACAGCGTCAT CTGGACCGAA GAGCAATAG
|
|---|
| Protein sequence | MYCPHCGATL PDGSQFCGSC GKRLNVTATP AAMPAPKKKT PIVPILAGVL GAVIVIGVGV
FAYQNFFAGI AINEENFPDK AVIKFVEKQD ENDNGRLTSK EAGAVTKIDL SRDVDSDDTP
ATDLTGLDVF VNAKRIDVSG NELEGTVDFS GFAHLTKVDV SDNTGDLELV LPDGFDEADL
ETGDSSITYT IGDKTVRKIA CSYVTEYVDI SDKTDYEDSW YTAFTYPVLS CDAYSKHIDQ
LNEENRVAVQ EAAERYLTDD VHINGDDGLY YLNSNIYVGH LDERAGVVSF VTDVYEIGAR
SAHGMTYRSG RIVDLSTGEE LTAAEYLGIS QDELDSMTQE ACRTFVSLYG SDIYEPEIAL
DNFFSLIRDG SIPYLLLDEG VVAFAPDYAL GSYAYGNHLI MVAPSADSTY AAGDEIFLEC
PDENSVIWTE EQ
|
|---|
| |