Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01210 |
Symbol | |
ID | 8394013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 154563 |
End bp | 155300 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644984894 |
Product | transposase |
Protein accession | YP_003142544 |
Protein GI | 257062872 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAA GCGCGCGTCA GCAGAGCGAA AGCGGATATC ACCACGTAAT GATGCGGGGG ATAGGCCGAC AGCTGCTTTT CGAAAACAAT GACGAACGAA ATGCGTTTCT GGACATCGTT CGGCGGTATC GCGACGCAAT GAACATTTCC GTAATCGCCT GGTGCCTGAT GGACAACCAC ATTCACCTTC TCTTGAAGGA TAACGAAGGG AACCTGAGCA AGGCGATGCA GCGGATCGCA GTAACGTTTG CCCAGTTCCA CAACAAGAAC GCCGACCATG TGGGCCATGT TTTCGAGAAC CGCTTCAAGA GCAAGCCGAT CGAATCCGAC GCGCAGCTGC TCGCGTGCCT TCGCTACATT CACGACAACC CAGCTAAGGC AGGCATATGT GCGGCCGATG TCTACCCGTG GAGCAGCTTT CGTGAATATG TTTGCGGGGG TGAGCTGACG GACACCGACC TTGTGCTTGA CATGCTCGGC GGGCGGGAGG CATTTCTTGA TTTTAGCCAT GCGGCCGCCA GTGCGTACGA CGAACCGGGC AAGCCGATGC GCATGGCCGA CGAGGATGCT CATACGGCAA TGCGTACCGT TCTTGGCGAA GCCGGTATGT ATGACCTGGA ATATGGCTCG AAGGAGAAAA GAGATGCGGC GCTGCGTATG TTGAAAGGAG CCGGCCTGAC GGTGCGGCAA ATCGAGCGCC TGACCGGCAT AGGGCGCTCA ACGATACAAC GAGCGTGA
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Protein sequence | MARSARQQSE SGYHHVMMRG IGRQLLFENN DERNAFLDIV RRYRDAMNIS VIAWCLMDNH IHLLLKDNEG NLSKAMQRIA VTFAQFHNKN ADHVGHVFEN RFKSKPIESD AQLLACLRYI HDNPAKAGIC AADVYPWSSF REYVCGGELT DTDLVLDMLG GREAFLDFSH AAASAYDEPG KPMRMADEDA HTAMRTVLGE AGMYDLEYGS KEKRDAALRM LKGAGLTVRQ IERLTGIGRS TIQRA
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