Gene Shel_01210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01210 
Symbol 
ID8394013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp154563 
End bp155300 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID644984894 
Producttransposase 
Protein accessionYP_003142544 
Protein GI257062872 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAA GCGCGCGTCA GCAGAGCGAA AGCGGATATC ACCACGTAAT GATGCGGGGG 
ATAGGCCGAC AGCTGCTTTT CGAAAACAAT GACGAACGAA ATGCGTTTCT GGACATCGTT
CGGCGGTATC GCGACGCAAT GAACATTTCC GTAATCGCCT GGTGCCTGAT GGACAACCAC
ATTCACCTTC TCTTGAAGGA TAACGAAGGG AACCTGAGCA AGGCGATGCA GCGGATCGCA
GTAACGTTTG CCCAGTTCCA CAACAAGAAC GCCGACCATG TGGGCCATGT TTTCGAGAAC
CGCTTCAAGA GCAAGCCGAT CGAATCCGAC GCGCAGCTGC TCGCGTGCCT TCGCTACATT
CACGACAACC CAGCTAAGGC AGGCATATGT GCGGCCGATG TCTACCCGTG GAGCAGCTTT
CGTGAATATG TTTGCGGGGG TGAGCTGACG GACACCGACC TTGTGCTTGA CATGCTCGGC
GGGCGGGAGG CATTTCTTGA TTTTAGCCAT GCGGCCGCCA GTGCGTACGA CGAACCGGGC
AAGCCGATGC GCATGGCCGA CGAGGATGCT CATACGGCAA TGCGTACCGT TCTTGGCGAA
GCCGGTATGT ATGACCTGGA ATATGGCTCG AAGGAGAAAA GAGATGCGGC GCTGCGTATG
TTGAAAGGAG CCGGCCTGAC GGTGCGGCAA ATCGAGCGCC TGACCGGCAT AGGGCGCTCA
ACGATACAAC GAGCGTGA
 
Protein sequence
MARSARQQSE SGYHHVMMRG IGRQLLFENN DERNAFLDIV RRYRDAMNIS VIAWCLMDNH 
IHLLLKDNEG NLSKAMQRIA VTFAQFHNKN ADHVGHVFEN RFKSKPIESD AQLLACLRYI
HDNPAKAGIC AADVYPWSSF REYVCGGELT DTDLVLDMLG GREAFLDFSH AAASAYDEPG
KPMRMADEDA HTAMRTVLGE AGMYDLEYGS KEKRDAALRM LKGAGLTVRQ IERLTGIGRS
TIQRA