Gene Shel_01170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01170 
Symbol 
ID8394009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp149413 
End bp150144 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID644984890 
Productmolecular chaperone GrpE (heat shock protein) 
Protein accessionYP_003142540 
Protein GI257062868 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG ACGACGAGAA GAAGGTCGCC TCTGGAGCAC ATGAGATTCC GATCGATAGT 
GCTGACGCGG AGGAGACGGC GAACGCCTCC TCCGCCCCCG AAGAGGTAGA ACCCGAAACC
GCAGAAGAGG TCGAGGCCGA GGTCATCGAA CCTGAGGCCG AGCCCGAAGC CGCACCGGAG
GCTGCCGCTG AGGAAACCGC GTTCGCGGAT GCCGTCGAAG CTGAAGCGCT CGAAGGCGAG
GAGGTTCCCA CCCTCGACGA GCTGGCTCAG GCGAAAGCTG ATGCGGCCGC GATGCGCGAC
AGGTACCTGC GTCTGCAGGC CGACTGGGAC AACTTCCGCA AGCGCACCGC CGAGCAGAAC
GCAGAAATGC GTCAGCGCGC GACGGAACGC CTGATGGAAG ACGTGCTCCC GGTGCTCGAC
GACTTCGAGC GCGCCATCGC GCATGCTTCC CAGAACGGCG AGACGGGCCT GCTGGACGGC
GTGAAGGCCA TCAGTACCAA GCTGAACGAG GTGCTGGCCA AACACGGGTT GGAACCCATC
GGCGAACCCG GCGAACCGTT CGACGCCATT GCGCATCAGG CGGTCGCCAC GGTTCCGGAC
GATTCGGTTC CCGACGAGAC GGTTGCCCAG GTGTACCAGA AGGGATACCG CATGGGCGGC
AAGGTCATCC GATCGGCAAT GGTGACCATC ACAACGGGTG GTCCGCGCCG TGAGGCTGAA
GACGATAAGT AA
 
Protein sequence
MAQDDEKKVA SGAHEIPIDS ADAEETANAS SAPEEVEPET AEEVEAEVIE PEAEPEAAPE 
AAAEETAFAD AVEAEALEGE EVPTLDELAQ AKADAAAMRD RYLRLQADWD NFRKRTAEQN
AEMRQRATER LMEDVLPVLD DFERAIAHAS QNGETGLLDG VKAISTKLNE VLAKHGLEPI
GEPGEPFDAI AHQAVATVPD DSVPDETVAQ VYQKGYRMGG KVIRSAMVTI TTGGPRREAE
DDK