Gene Shel_01090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01090 
Symbol 
ID8394001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp139972 
End bp140406 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID644984882 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_003142532 
Protein GI257062860 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.471424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG AGAAGATCCG CGCGTATGCG GAAATCATGG ACGAAATGGG ACTTACCGGG 
CTGGAAGTTG AAGAAGGCGG CGCGAAAATC CGCCTCGAAC GCGGCGTCCC CCAAGCCGCG
GCTCCCGTCG TCATAACCCA GCAGGGGCTT GCCGGCGACG GTGCGGCAGA TGCGGAGTCC
GCCACCCCGA AGGGCGAACT GTACTCGGTT CGCTCGCCTC TCGTGGGCGT GTTCTACGTG
GCCCCGGCCG AAAACGCCGA ACCGTTCGTC ATGCCCGGCG ATCGCGTGAA GAAGGGTCAG
ACGCTCTGCA TCGTCGAGGC CATGAAGCTC ATGAACGAAA TCACCGCCGA AGAACCCGGC
GTTGTCGAGA AGGTTTGCGT GACCAACGGC CAGATGGTCG AATACGGCGC CGAGCTGTTC
CAGATAAGAA GGTAA
 
Protein sequence
MHDEKIRAYA EIMDEMGLTG LEVEEGGAKI RLERGVPQAA APVVITQQGL AGDGAADAES 
ATPKGELYSV RSPLVGVFYV APAENAEPFV MPGDRVKKGQ TLCIVEAMKL MNEITAEEPG
VVEKVCVTNG QMVEYGAELF QIRR