Gene Shel_01060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01060 
Symbol 
ID8393998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp136970 
End bp137866 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID644984879 
Product(acyl-carrier-protein) S-malonyltransferase 
Protein accessionYP_003142529 
Protein GI257062857 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.271896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCC TAGCGTTCGT GTTCTCCGGC CAGGGCGACC AGCGCCCGGG CATGGGCAAG 
GACCTTTACG ACCAAGGTGG AGCGGCGGCG CGCGTTTTCG ACACGTGCGA ACGGCTGCGC
CCCGGCACCA TCGACCAGTG CTTTGGCGCG TCGTTGGACG AGCTGAGCCG GACGGAAAAC
GCGCAGCCAT GCCTGTTCGC GATGGAGCTC GCCATGGCGG AAAGCCTTCG CGAGCAGGGC
ATAAGCCCTC AGGCGGTAGC AGGCTTCTCG CTCGGCGAGA TGGTCGCGGC CACGTTTGCG
GGCGTGTTCA CGCCGGAGGA CGGGTTCGGT CTCGTATGCA CGCGCGGGCG GCTCATGCAG
CAGGCTGCAC AGCGCTTCGA CACGTTCATG GCTGCTGTGG TTAAACTGGA TGCATCCCAG
GTCAGAAGTC TGTGCGAGCA GATGCCCGAT GTGTATCCGG TCAATTTCAA CTGCCCGGGG
CAAACCACGG TGGCGGGGTC TTCTCTTCAG CAGGCCGCGT TCATCGAGTC GGTGCGCCAG
GCGGGCGGCC GCGCGATTCC GCTTAACGTG TCGGGCGCGT TCCATTCGCC GTATATGGAA
GAGGCCGCAG GCGCATTTGC GAAGGAGCTC AGGCTCAAGC AGGCCCATCC TGCGAACATC
GCGATGTATT CGAACGTGAC GGGCGGCCCG TACGGAACGA TCGATCCGGT CGATCTGCTG
TGGCGCCAGG TGGCAAGCCC GGTGCTGTGG GAAACCGAGG TGGGTCGCAT GATTGACGAC
GGAATAGACA CCTTCGTCGA GATAGGTCCT GGCCACACGC TGACCAACAT GATCCGGCGG
ATTTCCTCGG AGGTCCGCGC GGTAAGCGCC GCCGAGTGCA ACGTCGCGGA GCTCTAA
 
Protein sequence
MAGLAFVFSG QGDQRPGMGK DLYDQGGAAA RVFDTCERLR PGTIDQCFGA SLDELSRTEN 
AQPCLFAMEL AMAESLREQG ISPQAVAGFS LGEMVAATFA GVFTPEDGFG LVCTRGRLMQ
QAAQRFDTFM AAVVKLDASQ VRSLCEQMPD VYPVNFNCPG QTTVAGSSLQ QAAFIESVRQ
AGGRAIPLNV SGAFHSPYME EAAGAFAKEL RLKQAHPANI AMYSNVTGGP YGTIDPVDLL
WRQVASPVLW ETEVGRMIDD GIDTFVEIGP GHTLTNMIRR ISSEVRAVSA AECNVAEL