| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01050 |
|---|
| Symbol | |
|---|
| ID | 8393997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 136038 |
|---|
| End bp | 136982 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644984878 |
|---|
| Product | 2-nitropropane dioxygenase-like enzyme |
|---|
| Protein accession | YP_003142528 |
|---|
| Protein GI | 257062856 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | [TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.250641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCT CACCTATCTG CGAGTTGCTG GGCATCACCT ACCCGGTCTT CCAAGGCGGA
ATGGCCTGGA TCGCCGACGG AACCCTTGCC GCTGCCGTGT CGAACGGCGG CGGGCTGGGC
ATCATAGCCG CAGGCAGCTC ATCGGGCGAA CACGTGCGCG CGCAGATCCA TATAGCCCGA
TCCATCACAT CGCGCCCCAT CGGCGTGAAC ATCATGCTCA TGAGCCCGCA TGCAGAAGAG
GTCGCGAAGG TCGTGGCCGA GGAGCGCATC GACGTCGTGA CCACCGGGGC GGGCAATCCC
TCCAAGTTCA TGGGTGCATG GCACGAGGCG GGCATCAAGG TGGTGCCTGT GGTCGCGTCG
GTGGCCATGG CTAAACTCAT GACGCGCCAG GGCGCAACGG CCCTTATTGC CGAAGGCGGC
GAGAGCGGCG GGCATGTGGG CGAGCTCACG ACCATGGTGC TGGTCCCCCA AGTGTGCGAC
GCCACCGACC TGCCGGTCAT CGCGGCGGGC GGCATCGCCG ACGGCCGCGG GGTGGCGGCG
GCGTTCATGC TGGGCGCATG CGGCGTCCAG ATGGGAACCC GCTTCCTGAG CGCCGAAGAA
TGCAGAATCC ACCCGCGCTA CAAGGAGCTC ATCCTGAAGG CGACCGACCT GTGCACCATG
GTGACGGGCA AGCGCCTGGG GCATCCGGTG CGCAGCCTGC GCACGCCTTT CGCGCGAAAC
TACGCTGCAA CGGAATTCAG CGGCGCTGCG GATGAAGACC TGGAAGGGCT GGCGACGGGT
AAATTCCGAC TGGCGGTCCA AGAAGGCGAC TTCGACGAGG GCTGCTTCTT GTCTGGCCAG
GTAGCGGCCA TGGTCAAGAA GGAACAGCCT GCGGCCGACA TCGTGAAAGA AGTTATGGAA
GAGGCCGAAG GCGTCCTGAA AGGGGCTTCG TCATGGCTGG CCTAG
|
|---|
| Protein sequence | MIASPICELL GITYPVFQGG MAWIADGTLA AAVSNGGGLG IIAAGSSSGE HVRAQIHIAR
SITSRPIGVN IMLMSPHAEE VAKVVAEERI DVVTTGAGNP SKFMGAWHEA GIKVVPVVAS
VAMAKLMTRQ GATALIAEGG ESGGHVGELT TMVLVPQVCD ATDLPVIAAG GIADGRGVAA
AFMLGACGVQ MGTRFLSAEE CRIHPRYKEL ILKATDLCTM VTGKRLGHPV RSLRTPFARN
YAATEFSGAA DEDLEGLATG KFRLAVQEGD FDEGCFLSGQ VAAMVKKEQP AADIVKEVME
EAEGVLKGAS SWLA
|
|---|
| |