Gene Shel_00970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00970 
Symbol 
ID8393989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp125438 
End bp126409 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content62% 
IMG OID644984870 
ProductZn-dependent alcohol dehydrogenase 
Protein accessionYP_003142520 
Protein GI257062848 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0694743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.849606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAG GTTGGCAATT CACCGGCACT GACGAGCCCC TCGTTTTCGT CGAGAAGCCC 
ATGCCCGAGC TGAAGTCGGG TTACTGCCTG ATCAAAGTGC TTGCATGCGG CCTGTGCCAC
AGCGACACTT CCGCACTGCA TGATCCAGGT TGGTTGAACC TTATCAGCAC GCCGCGCATC
CTGGGCCATG AGACTGCCGG CGAAATCATC GAGATCGCTG ACGATGTGAA GAACTTCAAG
GTCGGCGACC GCGTCTGCAT CTGGCCCATG TATTCCGGCA TCGACGGCAC CGCCCAGGGC
TACACCCGTG ACGGAGGCTA CGCCAACTAC ACCGCAGCTC CCGAAGACGT GCTCATCAAA
GTCCCGGATT CGGTGGACAT CGTGCAGGCG GCGGCATCCA CCGATGCAGG CATGACTTCC
TATCATGCCG TCGTGGACCG TGCCGAAGTA CGTGAAGGCA CGAAGGTCGG CATCATCGGC
GTCGGCGGTC TTGGCCGCGT CGCCACCCGC ATCGCCGTGC TGCAGGGCGC CCAGGTCTAC
TGCGCCACCC GCAAGCAGCA GGCCAAGGAC GACGCCATGT CTTTGGGCGC CTACAAGACG
GCCGACAGCA TCCTCGACTT CAAGGACGAC CAGCTCGACG TGGTAGTCGA CTTCGCCGGC
GCCGGAACGA CCACCTCCGA CGCTCTGCTG GCCGTAAAGC CCGGCGGCCG CGTCGTCGTT
GTCGGCATGA CCAAGCTGGA GACCACCGTC AACACGAACG CGCTGATCAA CATGCAGACT
GAGCTGCGCG GCTCCGTGGG AGGCACGAAG GAAAGCATCG AGAACGTCAT CGCCCTTATG
GCCACCGGTG ACCTCACCAT TAATGCCATC GAAACCACTC TGGACAAGGT TCCCGAAGGC
CTTGACCTGC TGGACGGCGC TGGCGTTCCC GGCCGCCTGG TCATGCGCAC CCAGGACTCC
GACTTCGAGT AG
 
Protein sequence
MLKGWQFTGT DEPLVFVEKP MPELKSGYCL IKVLACGLCH SDTSALHDPG WLNLISTPRI 
LGHETAGEII EIADDVKNFK VGDRVCIWPM YSGIDGTAQG YTRDGGYANY TAAPEDVLIK
VPDSVDIVQA AASTDAGMTS YHAVVDRAEV REGTKVGIIG VGGLGRVATR IAVLQGAQVY
CATRKQQAKD DAMSLGAYKT ADSILDFKDD QLDVVVDFAG AGTTTSDALL AVKPGGRVVV
VGMTKLETTV NTNALINMQT ELRGSVGGTK ESIENVIALM ATGDLTINAI ETTLDKVPEG
LDLLDGAGVP GRLVMRTQDS DFE