Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00950 |
Symbol | |
ID | 8393987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 123549 |
End bp | 124514 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644984868 |
Product | NAD-dependent protein deacetylase, SIR2 family |
Protein accession | YP_003142518 |
Protein GI | 257062846 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0748135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.482885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTT ACGAGCAATT GGTCGTCCAA CTGACCAACC AGTCCTTCAG GTACCAGCAT GTCTACCGCC AGGGCGGCAC GCCCTACAGG CTGACCGAGA AGGAGCCGCT GCCTTACGAA GAGCAAATCA AGGCGTTCGC CCACATGGTC GAGCAGGCCG ACTGCATCCT GGTGGGTGCG GCATCGGGAC TTTCCGCGGC CGGCGGCGGC GACTTCTATT ACGAAGACAA CGAGTCGTAC CGCGCCTATT TCGGCAAGTT CGCCGAGAAA TACGGGTTCC AAGGCGCTTT CGCCGGCATG ATGCACCCGT GGGAAACCGC CGAGGAGCGC TGGGGGTATC TGGCCACGTT TTTGAACACG ACGCTCAGCG TGCCCGTGCG TCAGCCCTAT GTGGACTTGG ACGCCGTAAT CCGCGACAAG GAATTCTTCA TCCTGACCAC GAACCAGGAT ACCCAGTTCA TGAAGCTGTA CCCCTGGGAC AAGGTGGCAG AAATCCAGGG CGATCACCGG TTCTTCCAGT GCCAGCACTG CTGCACCGAC GAGGTGTGGG ATGCCACCGA ACCCGTGGCG AAGATGATCG AGGGCATGGG CGAGGGCCTG GCGGTGCCCG CCGACCTGGT GCCGCGTTGC CCCCATTGCG GCGGCGAGGC GTTCCCTTGG GTGCGCGGCT ACGGCAACTT CCTGCAGGGC GAGCTGTATG ACGAGCAGTA CCGGAAGGTG TCCGACTGGC TTAGCGAACA TGCCCAGGAG AAGGTGCTGT TCATCGAGCT GGGTGTGGGC CGCATGACGC CCGCGTTCAT CCAGGAGCCG TTCTGGGCGC TGGTTTCGCA GCTGCCGCAG GCGAGCTATG TGGGCATCAA CAACGTGACG CAGTTTCTGC CGGAGGTCAT CGAGGACCGT GGCATCGCCA TCCGCGGCGA CATCGCCGAG GTGCTGACGG ACGTTCGCGC CGAGATGGGA CGATAA
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Protein sequence | MTPYEQLVVQ LTNQSFRYQH VYRQGGTPYR LTEKEPLPYE EQIKAFAHMV EQADCILVGA ASGLSAAGGG DFYYEDNESY RAYFGKFAEK YGFQGAFAGM MHPWETAEER WGYLATFLNT TLSVPVRQPY VDLDAVIRDK EFFILTTNQD TQFMKLYPWD KVAEIQGDHR FFQCQHCCTD EVWDATEPVA KMIEGMGEGL AVPADLVPRC PHCGGEAFPW VRGYGNFLQG ELYDEQYRKV SDWLSEHAQE KVLFIELGVG RMTPAFIQEP FWALVSQLPQ ASYVGINNVT QFLPEVIEDR GIAIRGDIAE VLTDVRAEMG R
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