Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00940 |
Symbol | |
ID | 8393986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 122855 |
End bp | 123397 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644984867 |
Product | transcriptional regulator |
Protein accession | YP_003142517 |
Protein GI | 257062845 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.146478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.42367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAC CGACCCTCGA CCGACGCACC CGCTACACCG TCATGGTGAT CCGCGAGGCG TTCTTCGAGC TGTTCCGCGA AGTCGGGTTC AACAAGATGA CCGTGGCCGA CATCTGCCGG CGCGCCGACA TCAACCGCGG CACCTTCTAT CTGCACTACG AGGATAAGTT CGCCCTGCTG GACGCGCTGA TCGACGAGGC GCTCGAGGCC GCCCCGCCGC TGGAGGGAAA CGCCCAGGCC AGCTTGTGCC AGCGGGCCCC CGCCAACGAC GAGTACCTGA TGCTGTACGC CGACGACGAA GTGTTCTCGC GCATCGCCGC CCGGGTGATC GAACAGGGTG CCCAGCAGAC CGTGCCCTCC ATTATGGAAA GGACCGGACT GTCCGAACAG GACGCCTACC TGCTGTTCGT GCACAACGCC TACGGCAACC TGGCCGTGAA CCGTCTGCTG GGTTGGAAGC GCGGCCCCGA GTTCGACCGT GCGCAAACGC TGCTGAACCT GTATTCGAGC GGCGGCATGG CGGCCCTCAG AAACCGCGCA TAG
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Protein sequence | MQEPTLDRRT RYTVMVIREA FFELFREVGF NKMTVADICR RADINRGTFY LHYEDKFALL DALIDEALEA APPLEGNAQA SLCQRAPAND EYLMLYADDE VFSRIAARVI EQGAQQTVPS IMERTGLSEQ DAYLLFVHNA YGNLAVNRLL GWKRGPEFDR AQTLLNLYSS GGMAALRNRA
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