Gene Shel_00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00870 
Symbol 
ID8393979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp115520 
End bp116029 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID644984860 
Producthypothetical protein 
Protein accessionYP_003142510 
Protein GI257062838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA ACAAGCGGAC CGCGCTGCGT GTGGCGGCGC TGTTCGCGAT TCTGTTTCTG 
ATCGGGTTTA CCATGCGGAT TCCCGCCATT TGGCTGAGCG GGTTCTATGG CATGCACGGT
GTGCTGAGCG CGCCGTTTTT CGGGGCGCTT GCCATGTGGC ATTACCGTCA CGGCGGCGCA
GGGTGGCAGC TGGTGGCGGC CACGCTTCTG CTTGCGGCGC TGCTCGGGAT GATGAGCCCG
GTCATGGGCG TCGCCTTCGC CGCGATGGCC GCAATCGCTG GTGTCGTGCG CGCGGTCGTT
GGCGGACGCG GGCACGGCGA CCTGGTGTCT GCGGCTGTTT TCGGTGCGGT CAGCTACCCG
TGCACCTTGG CCGCAGGCAT TGCCCTAGGT TCCTATTTCC CCACGTCATC TTCTGTTTTG
ACCATTGTTG TCATGACCGT TTTGGGCGTT GCGCTCAGTG TGCTCGGCGC CCTCCTCGTC
CCCTCCAAGA ACGGGACAAT GGGGACGTAG
 
Protein sequence
MQFNKRTALR VAALFAILFL IGFTMRIPAI WLSGFYGMHG VLSAPFFGAL AMWHYRHGGA 
GWQLVAATLL LAALLGMMSP VMGVAFAAMA AIAGVVRAVV GGRGHGDLVS AAVFGAVSYP
CTLAAGIALG SYFPTSSSVL TIVVMTVLGV ALSVLGALLV PSKNGTMGT