Gene Shel_00800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00800 
Symbol 
ID8393972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp107209 
End bp108048 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content56% 
IMG OID644984853 
Producthypothetical protein 
Protein accessionYP_003142503 
Protein GI257062831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGC TGCCGCACAA CGAGACGTTC AGCCGCCAAG GAGGCCCCAT GCTTATCGTT 
GAAATGACCC CCAACCTGCT TGGAATCAAA ATCGCAGGGG ATTACGACGA CTTGAACGAG
CTCTACGATG CCATCTGGGC CCTTACAATC GCCGACTCGG ATTTCCCCGA GGACAAGCGG
CTCAGAGGGA CCGCAGACGA GCTTGCCATG TCCACCCGGC TGCTTTCGCT TTGCTACGAC
ATCCGCCATG CCTACCAGGG CGACCGCAAT GTCGAACTCA AAGACAACGG ACTGAACGAA
TGGACCGCAG AGTATCTCGG CATCGACACG AACCTGAAAA GCGTTGTGTT CTCGGTCGAG
GTTCTCTACC CCGAGGCAAT GTACGAGGCG CTGATACTGA ATTATCTGAT GGCGAAGCGC
ACGAATCACA TGCTCGAATC AAACGCGGTG GACATGCGCG ACGAATGGCC CGGCGAATCG
CTTCTCGACG AACCGATGGC GATTGTTCGC GCTTATTTGG CAAAGCTTCT GGCTGCCGTG
GGGAAGCAGG CCACCAAGGG ACGGTTCGAA CGAATCAAAA AGGGAATGAA GAATTACCAG
TACGCTGCCG CCATGTACGA GCAGTGGGTC GACGTCATCA ACAACGATTT CGCAGGCATG
ACGAAACGGC GGCGTGCCGA GGAGCTGAGC GTCGTGGTGC GCGACATCAC CGAGTGCTAC
AAACACGATC AATACCTCGA CATGAAGGCC GATATAGACC GTGCTGCCGA AAAGCACGGA
TGCCATCGAA GCGAAATCCA GATTCCAGGC CTTTACGAAT GGGATGACAT CGAATGGTAG
 
Protein sequence
MDLLPHNETF SRQGGPMLIV EMTPNLLGIK IAGDYDDLNE LYDAIWALTI ADSDFPEDKR 
LRGTADELAM STRLLSLCYD IRHAYQGDRN VELKDNGLNE WTAEYLGIDT NLKSVVFSVE
VLYPEAMYEA LILNYLMAKR TNHMLESNAV DMRDEWPGES LLDEPMAIVR AYLAKLLAAV
GKQATKGRFE RIKKGMKNYQ YAAAMYEQWV DVINNDFAGM TKRRRAEELS VVVRDITECY
KHDQYLDMKA DIDRAAEKHG CHRSEIQIPG LYEWDDIEW