Gene Shel_00790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00790 
Symbol 
ID8393971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp105665 
End bp106984 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content62% 
IMG OID644984852 
Productphosphohistidine phosphatase SixA 
Protein accessionYP_003142502 
Protein GI257062830 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA CGCTCATACT CATGCGTCAC GGGAAGGCAT GCGCCGGTGA AGAGGGGCAG 
CCCGACTTCG ACAGGGAGCT TTCGGAACCG GGAAGGCGCT CGCTTAAGGC CACGCTGGCC
GATTCGCTCG CACAGCTCGA CACGCGAGGC TCCTTCGCTC TGTGGAGCAG CCCTGCCATT
CGCGCCATGC AAACCGCTGA GCTGATTAAA CGGGCGCTTG ATGACAAGGG CGTCAAGATT
GACGATGTTG TCGAGGCGGA ATCGCTTTGG AGCCAGGACG AAGACCCCTT CCTGCAGGCC
CTGTCGGAAA GCGACGCCGA CACCGTGTTC GCCGTCGGCC ACAACCCGTT CGTCGAGTCG
CTTACCGAGA AACTCACGGG CGCGGTGATT CCCTGTGCAA CGGGTGGGCT CGTCTGCATC
AGGATCGACA CCGACGCGCT GGCCCAGCCG ACCGAAGAAG ACGCCTCCGC AGGGCGCCTG
CTTTGGTTCG CGCAAGGGCC GGTTTCGCAG GACTGGAAGA CGCTTGTACA GATCGAAGAG
ACGCTCAAAG GCGCCGAGGC CACGATGCGA CACCGCCTTG AAGCGTTCAT GGCAGACCCC
GACGACATCG AGACGATGCA CAAGTTCCGT GTTTCAATCC GCACACTGCG CAGCCTGGTG
GCATTCGTCA AACCTTGGCA GCAGGCAGAT CAGAACGCCG AAACGCAAAC GCTGCTCAAA
AGCGTTGTGG CCCACACGTC CCGCCTGCGC GAGCTCGACG TATTTGCCCA GCAGGCGGCA
GCCTCGCAGA CGAGTTCCGC CGAGCTGGTC GAATTCTGCG AAGCCCAGGC GGCCGAAGAG
CGCGCCCGCG TGAAGAAGAT TCTGGAATCC AAGTCCACCA CCAAAGCCCT GAAGAGGGTG
CATTCGCTCA TCAAGGACCT CAAGTGGAAG CGTCGTCTGG AAGATGAGGG GCTGCCCGCC
TGCGTGGTGC GCGCCCGGTT CGACGCGCTT GTCACGGGGC TGGAGCAGGA TCTTGAAGAC
CTCACCCTTG CCGACGTGGA GCTGACCCAC GACGTGCGGA AAAAGGCCAA ACGCGCCCGC
TACGCCGCCG AGAACTTCAA GCCCATCGTT GGCGCCGACG CCGTGGGCGT CGCAAAGGGC
ATGACTGCAC ATCAGGACAA CCTCGGCGCC ATCTGCGACG CACGTGTGAA CATCGACCTG
ATCAACGGCT TCCTCGAGCA GGACGTGCCC GAAGTCGTAG CCTGGGACCT CACGCTGCTG
CGCGCCCAAA ACGAAATGTT CCTTTACACC CTGCTTCGCT CCGAACAACA GGACCTGTAA
 
Protein sequence
MAKTLILMRH GKACAGEEGQ PDFDRELSEP GRRSLKATLA DSLAQLDTRG SFALWSSPAI 
RAMQTAELIK RALDDKGVKI DDVVEAESLW SQDEDPFLQA LSESDADTVF AVGHNPFVES
LTEKLTGAVI PCATGGLVCI RIDTDALAQP TEEDASAGRL LWFAQGPVSQ DWKTLVQIEE
TLKGAEATMR HRLEAFMADP DDIETMHKFR VSIRTLRSLV AFVKPWQQAD QNAETQTLLK
SVVAHTSRLR ELDVFAQQAA ASQTSSAELV EFCEAQAAEE RARVKKILES KSTTKALKRV
HSLIKDLKWK RRLEDEGLPA CVVRARFDAL VTGLEQDLED LTLADVELTH DVRKKAKRAR
YAAENFKPIV GADAVGVAKG MTAHQDNLGA ICDARVNIDL INGFLEQDVP EVVAWDLTLL
RAQNEMFLYT LLRSEQQDL