Gene Shel_00740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00740 
Symbol 
ID8393966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp100494 
End bp101105 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID644984847 
Productconserved hypothetical integral membrane protein TIGR02185 
Protein accessionYP_003142497 
Protein GI257062825 
COG category 
COG ID 
TIGRFAM ID[TIGR02185] conserved hypothetical integral membrane protein TIGR02185 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.603366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAA AAGAAATCGC AGCCCAGCCG CAGAGCGACA AGAAACTGCG CACGAGGGAC 
CTCATCTATG CAGGTGCGTT CGGCGCAATC TATCTGGTGG TCATGCTCGC CATCGTTATG
GCCTCGGGCA TGGTCCCCGT CCTCTACCTT GTGGCCCCGC TCACGGTGGG CGTTGTGTGC
GGCACCATCT ACGAGATGTG CGTACTCAAG GTCCACAAGT TCGGCGCGGC CCTCATCCTG
GGCGTGCTGT TCGCGTTGGT GACCTGCAGC TCCAACATCA TCGGCGCCAT TTTGGCCGTC
GCGGCGGCCC TGCTGGCAGA ACTCATCATC TACCTGGGCA AATACAAGTC CAAGAAGCAT
TATTTGGCAT CGTTCGTGGC ATTCAACATC AACATGGCAT GCCCTTACAC CATGCTTTTG
CTGGCCTATG ACGACTTCAT GGTCCGCGCC GTCGAGTGGT ACGGACAGGA TTACGCGGAC
GGCCTGGCTG CGGTCACCTT CGACGGCGTC TGGTTCCTCA TCCTGGGCTT CGCCATCCTG
GGCGGCATCA TCGGCGCGGC GGTAGCCAGC AAGCTGATCG CCAAGCATTT CGAGAAGGCG
AGGATCCTGT AA
 
Protein sequence
MARKEIAAQP QSDKKLRTRD LIYAGAFGAI YLVVMLAIVM ASGMVPVLYL VAPLTVGVVC 
GTIYEMCVLK VHKFGAALIL GVLFALVTCS SNIIGAILAV AAALLAELII YLGKYKSKKH
YLASFVAFNI NMACPYTMLL LAYDDFMVRA VEWYGQDYAD GLAAVTFDGV WFLILGFAIL
GGIIGAAVAS KLIAKHFEKA RIL