| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00720 |
|---|
| Symbol | |
|---|
| ID | 8393964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 96469 |
|---|
| End bp | 99744 |
|---|
| Gene Length | 3276 bp |
|---|
| Protein Length | 1091 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644984845 |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_003142495 |
|---|
| Protein GI | 257062823 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGT TCGATAACGC AAGCTTCCAT TACGGCGGCG AAACCGGCAC CGGCGAAGGC
GTCGACGACA TCAACCTGCG CATTGCGCCT GGCGAATGCG TCCTGTTCTG CGGCAAGAGC
GGCTGCGGCA AAACCACGCT GACCCGCATG ATCAACGGAC TGGCCCCCAA CTTCTACGAG
GGCCAGATGG AAGGCGCCGT GTACGTGGAC GACATCTGCG TGACCACCGG CGAGCTGTCC
GACACGGCCG CCATTGTGGG CAGCGTGTTC CAGAACCCGA AAAGCCAGTT CTTCAACGTG
GACACCACCG GCGAGCTGGC CTTCGGCTGC GAAAACCAGG CCATGCCGCG GGATGAGATT
CATGCCCGCG TGGCCAAGGC CCGCGACGAT TTGAAGCTGA ACGCCCTGAT GGACCGCAAC
ATTTTCGACC TGTCCGGCGG CGAGAAGCAG CAGATCGCCT GCGGCTCGGT GTATGCGGCC
ACGCCGAAGG TGTACGTGCT CGATGAGCCC TCCAGCAACC TGGACCGCAA GGCCATCCGG
CGCCTGCACG ACATGCTGGC CCGGGTGAAG GCCCAGGGCT CGACCATCGT TCTGTCCGAG
CACCGCATCT ATTATCTGAT GGATTTGGTG GACCGCTTCA TCTATCTGGA CGACGGCCGC
ATAGCAGCGG AATACACCGC TGCCGACCTG CAGGCCATGT CCGACGACCA GCTGCGTGAC
CTGGGCCTGC GCTGCACCAG CCTGCAGACC CTGCACCGCG GCCGGAACGC GCACCGCCAT
CTGCCGGGCG AAGCGACGCG CAAGCCCAGC GTGGAGGCGT TGGACCTGTC CTGCAACCGC
GGCGGCACGC AGATTCTGGA CATCGACCGC TTCGCCCTGC CCGAAGGCAG CGTGGTGGCG
CTCATCGGCG ACAACGGCTG CGGCAAATCC ACGCTGTCCG AGGTGCTGTG CGGGCTGATC
GCTTCCAGCG GCAGCGTTGC CCTGGACGGC ACGTACCTGA CCGACAAGGC CCGCAACCGC
GCAAGCTTTC TGGTCATGCA GGACGTGAAC CGGCAGCTGT TTTCGGACAA CGTGCTGGAC
GAGGTCCTGC TGAACTCAAC CGCCAGCCGC GAAGAGGCTT TGGCCGTGCT GGACAAGCTT
GAACTGGCCG AATGCGCCGA CCGCCACCCC GCTTCGCTTT CCGGCGGACA GAAGCAGCGC
GTGGCCATCG CCAGCGCCAT GTGCGCCGGC AAGGAGATTC TGTTCTACGA CGAGCCCACG
AGCGGCTTGG ACCGCAACGG CATGGAGCGG TTCGCCGCCC TGCTGGACGA CGCCCGCGAA
CACGTGAAAG CCCAGGTCAT CGTCACGCAC GACCCCGAGC TTATCATGCG GGCGTGCACC
CACGTCATGC ACATGGACAA CGGCCGGGTA ACCGGGGTGT ACCCGCTGGA TGGCGACGGC
GCCCGCCGCG TGCGGTACTA CTTCACGTCG GAGGCCAGCG ACTCCACCAG CCGCAAGCGC
GAACGCGTCA GCATGATCGG CAAAATCCTC AGCTACACGG GCGATCAGAA GCGCAACGTC
ATCAAGGCGG CCGTCATGAT GACCGCGGGA GCCGTGTTCT CCGTCCTTCC CTATCTTATC
GTGTATCACC TGGTCACACA GGCAATCGCC GGCGAAGCCG TCACGCTGGA AGGGTCGCTT
GCGCTGCTGG CGGGCATTCT GGCCTGCCTG GTGCTGAACG CGGTGCTGTA CGTGGGCGGC
CTGCAGGTTT CGCATCGGGC GGCGTACAAG ACACTTGAGA ACCTGCGCTG CTCGCTGCAG
GAAAAGCTCG AGGCGCAGCC CTTGGGCAAC ATCGCCGACA TGGGCACGGG CGCGGCGAAA
AAGCTGTTCG TGGACGACAT CGAATCCATC GAGCTGCTGC TGGCCCACAT GATTCCCGAA
GGAATAGCGA ACCTGGCCGT GCCGGCGGCG GTGCTGCTGC TCATGGCGGC CATCGATTGG
CGGTTGTGCC TGCTCACCGT GGTAATGGTG GCCTTCGGAA TGAGCGCCAC AAGCCAGATG
CAAAAAACGG GTGCCGACCG CATGGGCAGC TACTTCGCCT CGACGAAACG CCTGAACAAC
ACCATCATCG AGTACGTGAA CGGCATGGAG GTCGTCCGCG TGTTCAACCG CTCCCATGAG
CACCTGCGCA AGTTCGAGCA GGCGGTGCAC GGCTACCGCG ATTTCGCGCT GGCCTGGTAC
AAGGTGTGCT GGCCCTGGAT GGCCGTGTAC GGCAGCATCT TCTTCACGTG CACCCTGTAC
ACGCTGCCTT TCGGCGCGCT GCTGGTCATT ACGGAGAAGC TGACCTTGGC AAGCTACGTG
CTGGTGCTGT GCATGAGCTT CGGCATTGGG CCGCTGCTCA CCCACGTCAT GACGTACGCT
AGCGCAATTC CCCAGGTCAA CTACAAGATT CAGGCGCTGG AGAAATCCCT TGACCGTCTG
CCTTTAAAGA CCGGCGAGCG TGACTTCGCA GGCATAGGGC ACACCGTCGA GTTCGACAAC
GTGCATTTCG GATACGGCAA CGACGAGGTG CTCAAGGGAG TGTCGTTCAC GGCGCGGGAG
GGCGCCATGA CGGCCATCGT AGGACCCAGC GGCAGCGGCA AAAGCACGAC GGCCAAGCTG
GTGGCGCACT ACTACGACAT CGAGAGCGGC GCCATCCGCA TCGGCGGCCA GGACATTCGC
GATATGAGTC TGAAATCCCT CAACGACCAG GTGTCTTACG TGTCGCAGGA GCTGTTCCTG
TTCAACAAGA GCATCCTGGA GAACATCCGC ATCGGCCGGC CCGACGCCTC CGACGAGGAG
GTGCTGGCCG CAGCGAAGGC TGCGCTGTGC GACGAATTCG TGCGCGAGCT GCCGCAGGGC
TACCACACCA ATGCCGGCGC GGCGGGCGGC AAGCTTTCCG GCGGACAGCG CCAACGCATC
GCCTTCGCCC GCGCCATGCT GAAGGACGCC CCGATCATCG TGTTGGACGA GGCCACGGCG
TTTATCGACC CGGAGAACGC CGAGAAGATG AACGAGGCCG TGGCGCGGCT GGTCCGCAAC
AAGACCGTGG TAGTCATCGC GCACCGGCTG AGCTCCATCG TGAACGCGGA CAAGATCCTG
GTGTTCGACG ACGGCCAGGT CACAGGCGAA GGCACCCATG CCGAGCTGCT TGAATCCTGC
CCCACGTACC GTTCGCTCTG GAACGCATCC GAGCAGGTGG GCACCTGGAC CTTGAAAGAA
TCCGACGCGG CGGGAAGCGA GGTGGCGGCA TGCTAG
|
|---|
| Protein sequence | MILFDNASFH YGGETGTGEG VDDINLRIAP GECVLFCGKS GCGKTTLTRM INGLAPNFYE
GQMEGAVYVD DICVTTGELS DTAAIVGSVF QNPKSQFFNV DTTGELAFGC ENQAMPRDEI
HARVAKARDD LKLNALMDRN IFDLSGGEKQ QIACGSVYAA TPKVYVLDEP SSNLDRKAIR
RLHDMLARVK AQGSTIVLSE HRIYYLMDLV DRFIYLDDGR IAAEYTAADL QAMSDDQLRD
LGLRCTSLQT LHRGRNAHRH LPGEATRKPS VEALDLSCNR GGTQILDIDR FALPEGSVVA
LIGDNGCGKS TLSEVLCGLI ASSGSVALDG TYLTDKARNR ASFLVMQDVN RQLFSDNVLD
EVLLNSTASR EEALAVLDKL ELAECADRHP ASLSGGQKQR VAIASAMCAG KEILFYDEPT
SGLDRNGMER FAALLDDARE HVKAQVIVTH DPELIMRACT HVMHMDNGRV TGVYPLDGDG
ARRVRYYFTS EASDSTSRKR ERVSMIGKIL SYTGDQKRNV IKAAVMMTAG AVFSVLPYLI
VYHLVTQAIA GEAVTLEGSL ALLAGILACL VLNAVLYVGG LQVSHRAAYK TLENLRCSLQ
EKLEAQPLGN IADMGTGAAK KLFVDDIESI ELLLAHMIPE GIANLAVPAA VLLLMAAIDW
RLCLLTVVMV AFGMSATSQM QKTGADRMGS YFASTKRLNN TIIEYVNGME VVRVFNRSHE
HLRKFEQAVH GYRDFALAWY KVCWPWMAVY GSIFFTCTLY TLPFGALLVI TEKLTLASYV
LVLCMSFGIG PLLTHVMTYA SAIPQVNYKI QALEKSLDRL PLKTGERDFA GIGHTVEFDN
VHFGYGNDEV LKGVSFTARE GAMTAIVGPS GSGKSTTAKL VAHYYDIESG AIRIGGQDIR
DMSLKSLNDQ VSYVSQELFL FNKSILENIR IGRPDASDEE VLAAAKAALC DEFVRELPQG
YHTNAGAAGG KLSGGQRQRI AFARAMLKDA PIIVLDEATA FIDPENAEKM NEAVARLVRN
KTVVVIAHRL SSIVNADKIL VFDDGQVTGE GTHAELLESC PTYRSLWNAS EQVGTWTLKE
SDAAGSEVAA C
|
|---|
| |