Gene Shel_00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00580 
Symbol 
ID8393950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp76078 
End bp76266 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content58% 
IMG OID644984832 
Productdissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit 
Protein accessionYP_003142482 
Protein GI257062810 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00222598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATC CTGTACTCGA AACTGATGAA TGCATCGGCT GCGGCATCTG CGTTGATGCT 
TGCCCCCAGG AGGTTCTGGA CATTCAGGGT GGCACCGTCA CCATCGCCAA TGAGGACAAC
TGCATCGGCT GCGGCGAGTG CGTCGAAGAA TGCCCCATGG GCTGCATCAC CGAGATCGTC
GACGACTAA
 
Protein sequence
MAHPVLETDE CIGCGICVDA CPQEVLDIQG GTVTIANEDN CIGCGECVEE CPMGCITEIV 
DD