Gene Shel_00530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00530 
Symbol 
ID8393945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp71872 
End bp72105 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content65% 
IMG OID644984827 
Producthydrogenase assembly chaperone HypC/HupF 
Protein accessionYP_003142477 
Protein GI257062805 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.379393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTTG CAATACCCGC CCGCGTGACC GAGCTGGGCG AAAACAACCT GGCCACCGTG 
GACATCCTCG GCGTGACCCG CGAGGTCTCG CTGGACCTGA CGCCTCAGGC CGCCGTGGAC
GACTTCGTGC TGATCCACGC CGGGTTCGCC ATCGAGGTGG TCAGCGAGGA GGACGCCCAG
ATCACGCTGG ACCTCATCAA GCAGATGCCC GAACTCGCGG ACGATTTGGC GTGA
 
Protein sequence
MCLAIPARVT ELGENNLATV DILGVTREVS LDLTPQAAVD DFVLIHAGFA IEVVSEEDAQ 
ITLDLIKQMP ELADDLA