| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00500 |
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| Symbol | |
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| ID | 8393942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 66417 |
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| End bp | 67829 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644984824 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003142474 |
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| Protein GI | 257062802 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACC AGAAGAACCC CTACCGCATC TACCTGCGCG AAGACCAGAT TCCCACGCAG
TATTACAACC TGCGCGCCGA CATGCCCGAG CCGCCCGAGC CCATGCGTCT GCCCGACGGC
ACAGTGGCGC AGTTCGAGCA CTTGGCACCC GTGTTCGCCG ACGAGCTGGT CCGCCAAGAG
CTCGACAACG AGACGCGCTA CGTGGACATC CCCGAGGGAA TCCGCGAGAT GTACAAGGTG
TACCGCCCCA GCCCGCTGTG CCGTGCGTAC AACTTGGAAA AGGCCCTGGG CACGCCGGCC
AAGATCTACT ACAAGTTCGA GGGAAACAAC ACGTCGGGCT CGCATAAGCT GAACTCGGCG
CTGGCCCAGG CCTACTACGC CCATGAGCAG GGGTTGACCA CCATCACCAC CGAGACCGGA
GCCGGCCAAT GGGGCACCGC GCTGTCCGAG GCAGCCGCGC ACTACGGGCT GAACTGCGAC
GTCTTCATGG TGCGCGCATC CTACGAGCAG AAGCCCTTCC GCCGTTCCGT CATGCAGACC
TTCGGCGCCC AGGTCACGCC GTCGCCTTCA CAGGAAACCG AAATCGGCCG CAAGATGTAT
GCCGACGAGG CGAACCGTTC CGGATCGCTG GGCACCGCCA TTTCCGAGGC CGTGGAGCGC
GCGCTGCATG TTCCCGAGAA CAAGGGTCGC TACCAGCTGG GATCCGTGCT CAACCAGGTG
GTGCTGCACC AGTCCATCAT CGGTCTTGAA AGCCTGGCTG CCTTTGATGA GCTGGGCGAA
TATCCCGACG TGGTCATCGG CTGCGCTGGC GGCGGCTCCA ACCTGGGCGG CCTGATCGCG
CCGTTCATGC GTGACAAGCT GACCGGCGAA AAGCCCGATA CGCGTTTCAT CGCCGTGGAG
CCCGCGAGCT GCCCGAGCCT GACCCGTGGC CGCTACGCCT ACGACTTCGC CGATACGGGC
CAGACCTGCC CGCTGGTCAA GATGTACACG CTGGGTAACG GGTTCATTCC CAGCCCCGAT
CATGCCGGCG GCCTGCGCTA CCACGGCATG AGCCCTATCA TCTCCAAGTT GAAGCATGAC
GGGTACCTGG ACGCCGTCAG CGTGAAACAG ACCGACGTGT TCGCGGCGGC CGAAGAGTTC
GCCAAGTTGG AAACCATCCT GCCCGCGCCC GAAAGCGCTC ATGCCATTTG CGTCGCCATG
GAAGAGGCCC GCAAGTGCGC CGAAACCGGT GAGGAGAAGG TCATCCTGTT CGGCCTGACC
GGCACCGGGT ACTTCGACAT GACGGCCTAT GAGGCGTTCA ACAACGGGAC CATGGTCGAC
CACGTTCCCA CCGACGAGGA GCTGGAGCGC GGATTTGCCA CCATTCCTGC GGTGCCCGGC
ATCCAGGACG CAGGCGGCGC ACCCGTGGCA TAG
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| Protein sequence | MENQKNPYRI YLREDQIPTQ YYNLRADMPE PPEPMRLPDG TVAQFEHLAP VFADELVRQE
LDNETRYVDI PEGIREMYKV YRPSPLCRAY NLEKALGTPA KIYYKFEGNN TSGSHKLNSA
LAQAYYAHEQ GLTTITTETG AGQWGTALSE AAAHYGLNCD VFMVRASYEQ KPFRRSVMQT
FGAQVTPSPS QETEIGRKMY ADEANRSGSL GTAISEAVER ALHVPENKGR YQLGSVLNQV
VLHQSIIGLE SLAAFDELGE YPDVVIGCAG GGSNLGGLIA PFMRDKLTGE KPDTRFIAVE
PASCPSLTRG RYAYDFADTG QTCPLVKMYT LGNGFIPSPD HAGGLRYHGM SPIISKLKHD
GYLDAVSVKQ TDVFAAAEEF AKLETILPAP ESAHAICVAM EEARKCAETG EEKVILFGLT
GTGYFDMTAY EAFNNGTMVD HVPTDEELER GFATIPAVPG IQDAGGAPVA
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