Gene Shel_00480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00480 
Symbol 
ID8393940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp62787 
End bp64520 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content64% 
IMG OID644984822 
Productglucose-6-phosphate isomerase 
Protein accessionYP_003142472 
Protein GI257062800 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCT GCGATTGCAA TGGTTCGTAT CCCTCCGCGC AACGCCTTGT CGACAACAAG 
GTGGCTAGTC GCGTGCACGC CAAAGACGGC GGCCTGTACA ATTTCGCCGA AGGCATGCCC
GAAGCCGCGG GCAGCTTCAT GGGCTGGGCC ACGCTGGCCA GCCAGCCGCC GGTATCCATC
GAGGCGATCA AGGCCTTCGC CAAGCAAGTG CGTGCCGAAG GATACACGTC GTGCCTGCTA
ATAGCGCAGG GCGGCAGCTC CCAGGCACCC ATGACCATCA CCAAATACAA CAAGGGCGAC
CGCTATCACT TTAAATTCCA CGTGCTGGAC AACGTGTCGC CCGTGCGCAT GCACGCCCTG
ACCCACAACC TGAATTTCGA GAAGACCCTG GTGCTGGTGT CCAGCAAATC CGGCGGCACC
ATCGAAGTGC GCTCGAACCT GAGCATCGTG TATCGCCTGT TCACGGAGGC GTTGGGAGAA
GACGCGCCGC AGCATTTCGT GGCGATCACC GACCCGGGCA CGCAGCTTGA GACCCGCGCC
TTGGACGAGG GCTGGCGAGC CGTGTTCAGC GGCGAACCCA CCGTGGGCGG ACGGTTCAGC
GCGCTGTCGG TGTTCTGCCT GGTTCCGGCT GCACTCATCG GGCTGGACCT GGATCAGGTC
ATCGAGAAGG CCCGCGCCGC CGAGGCCGCC TGCTCCGCCG ACAGCCTGGA CAACCCCGCC
ATCGGCTTGG CCTCGTTCAT GTACGACTCC ATGCTCGAGG GTCGCGACAA GTTCAGCCTG
ATCACGCCCA AGCGCGCCCG TACCTTCGGT CTGTGGATCG AGCAGCTCGT GGCCGAAAGC
GTCGGCAAGA ACGGCAAGGG CATCCTGCCG AACATCGAGT TCGACCCGCT GGTGCTGAGC
ATCGACCACG GCGACCGCAC GGTGATTCCC TACCTGGTCG AGACGCCGCT CGACGATGAG
CGCGAGAACT TCCAGCTCGG CCTGGACCGC ATCGATCCGG CATACCCGCG CCGCACCTAC
GAGGTGACGG ATGTTACCGA CCTGTTCGCC CACTTCGTCA TGTGGGAATA CGCCACCGCC
ATGGTGGGTT GGCTTATGGA GCTCAACCCC TTCGACCAGC CCGACGTGGC TCTGCCCAAG
GCCGCCACGC TGGATATCCT GAAGTCCGGC ATGCCGCAGC CCAGCTTTAC CGAGACGTTC
CTCGGCGGGA TTGACCTTGG CAAAGTCGAA GTCACCTGCA GCCCCGCCGT GGCCGCTGAC
AACCTGCACG ACGCGCTGTA CAACCTGTTC GCATCCATCG AGCCCGGAGA CTATTTCGCC
TTCGACGCCT TCGTGCCCTT CACCGGCGAC AACCGCCGCG AGGCGCTGGA GGGCATCCGC
CGCCTGGTAG CCTCGGAGCT GAACGTAGTG TCTTGCCTAG AACTGGGCCC GCGCTATCTC
CACTCCACCG GCCAGCTGCA GAAAGGCGGC ACCAACAACG GTGTCTTCCT GGTGGTTTCG
ACAGGCGAAA TCGACGATAT CCCGCTGGAG GGGCTGGAGG CCGCATCCCT CGGCGAGCTG
GCGAAAGCCC AGGCCGCAGG CGACACCGCC ATCCTGATCG ACCGCGGACG GCGCGTGGTG
CACCTGCATC TGCCCGACAA CGCCGGCATC ACGCTGCGCC TATTGGAAAA GGCCGTGACC
GACATCGTCT TCGAGCTGAA ATCCGGCACC CGCACCGGCA TCTGGAACGC ATAG
 
Protein sequence
MLSCDCNGSY PSAQRLVDNK VASRVHAKDG GLYNFAEGMP EAAGSFMGWA TLASQPPVSI 
EAIKAFAKQV RAEGYTSCLL IAQGGSSQAP MTITKYNKGD RYHFKFHVLD NVSPVRMHAL
THNLNFEKTL VLVSSKSGGT IEVRSNLSIV YRLFTEALGE DAPQHFVAIT DPGTQLETRA
LDEGWRAVFS GEPTVGGRFS ALSVFCLVPA ALIGLDLDQV IEKARAAEAA CSADSLDNPA
IGLASFMYDS MLEGRDKFSL ITPKRARTFG LWIEQLVAES VGKNGKGILP NIEFDPLVLS
IDHGDRTVIP YLVETPLDDE RENFQLGLDR IDPAYPRRTY EVTDVTDLFA HFVMWEYATA
MVGWLMELNP FDQPDVALPK AATLDILKSG MPQPSFTETF LGGIDLGKVE VTCSPAVAAD
NLHDALYNLF ASIEPGDYFA FDAFVPFTGD NRREALEGIR RLVASELNVV SCLELGPRYL
HSTGQLQKGG TNNGVFLVVS TGEIDDIPLE GLEAASLGEL AKAQAAGDTA ILIDRGRRVV
HLHLPDNAGI TLRLLEKAVT DIVFELKSGT RTGIWNA