Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00480 |
Symbol | |
ID | 8393940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 62787 |
End bp | 64520 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644984822 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_003142472 |
Protein GI | 257062800 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCCT GCGATTGCAA TGGTTCGTAT CCCTCCGCGC AACGCCTTGT CGACAACAAG GTGGCTAGTC GCGTGCACGC CAAAGACGGC GGCCTGTACA ATTTCGCCGA AGGCATGCCC GAAGCCGCGG GCAGCTTCAT GGGCTGGGCC ACGCTGGCCA GCCAGCCGCC GGTATCCATC GAGGCGATCA AGGCCTTCGC CAAGCAAGTG CGTGCCGAAG GATACACGTC GTGCCTGCTA ATAGCGCAGG GCGGCAGCTC CCAGGCACCC ATGACCATCA CCAAATACAA CAAGGGCGAC CGCTATCACT TTAAATTCCA CGTGCTGGAC AACGTGTCGC CCGTGCGCAT GCACGCCCTG ACCCACAACC TGAATTTCGA GAAGACCCTG GTGCTGGTGT CCAGCAAATC CGGCGGCACC ATCGAAGTGC GCTCGAACCT GAGCATCGTG TATCGCCTGT TCACGGAGGC GTTGGGAGAA GACGCGCCGC AGCATTTCGT GGCGATCACC GACCCGGGCA CGCAGCTTGA GACCCGCGCC TTGGACGAGG GCTGGCGAGC CGTGTTCAGC GGCGAACCCA CCGTGGGCGG ACGGTTCAGC GCGCTGTCGG TGTTCTGCCT GGTTCCGGCT GCACTCATCG GGCTGGACCT GGATCAGGTC ATCGAGAAGG CCCGCGCCGC CGAGGCCGCC TGCTCCGCCG ACAGCCTGGA CAACCCCGCC ATCGGCTTGG CCTCGTTCAT GTACGACTCC ATGCTCGAGG GTCGCGACAA GTTCAGCCTG ATCACGCCCA AGCGCGCCCG TACCTTCGGT CTGTGGATCG AGCAGCTCGT GGCCGAAAGC GTCGGCAAGA ACGGCAAGGG CATCCTGCCG AACATCGAGT TCGACCCGCT GGTGCTGAGC ATCGACCACG GCGACCGCAC GGTGATTCCC TACCTGGTCG AGACGCCGCT CGACGATGAG CGCGAGAACT TCCAGCTCGG CCTGGACCGC ATCGATCCGG CATACCCGCG CCGCACCTAC GAGGTGACGG ATGTTACCGA CCTGTTCGCC CACTTCGTCA TGTGGGAATA CGCCACCGCC ATGGTGGGTT GGCTTATGGA GCTCAACCCC TTCGACCAGC CCGACGTGGC TCTGCCCAAG GCCGCCACGC TGGATATCCT GAAGTCCGGC ATGCCGCAGC CCAGCTTTAC CGAGACGTTC CTCGGCGGGA TTGACCTTGG CAAAGTCGAA GTCACCTGCA GCCCCGCCGT GGCCGCTGAC AACCTGCACG ACGCGCTGTA CAACCTGTTC GCATCCATCG AGCCCGGAGA CTATTTCGCC TTCGACGCCT TCGTGCCCTT CACCGGCGAC AACCGCCGCG AGGCGCTGGA GGGCATCCGC CGCCTGGTAG CCTCGGAGCT GAACGTAGTG TCTTGCCTAG AACTGGGCCC GCGCTATCTC CACTCCACCG GCCAGCTGCA GAAAGGCGGC ACCAACAACG GTGTCTTCCT GGTGGTTTCG ACAGGCGAAA TCGACGATAT CCCGCTGGAG GGGCTGGAGG CCGCATCCCT CGGCGAGCTG GCGAAAGCCC AGGCCGCAGG CGACACCGCC ATCCTGATCG ACCGCGGACG GCGCGTGGTG CACCTGCATC TGCCCGACAA CGCCGGCATC ACGCTGCGCC TATTGGAAAA GGCCGTGACC GACATCGTCT TCGAGCTGAA ATCCGGCACC CGCACCGGCA TCTGGAACGC ATAG
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Protein sequence | MLSCDCNGSY PSAQRLVDNK VASRVHAKDG GLYNFAEGMP EAAGSFMGWA TLASQPPVSI EAIKAFAKQV RAEGYTSCLL IAQGGSSQAP MTITKYNKGD RYHFKFHVLD NVSPVRMHAL THNLNFEKTL VLVSSKSGGT IEVRSNLSIV YRLFTEALGE DAPQHFVAIT DPGTQLETRA LDEGWRAVFS GEPTVGGRFS ALSVFCLVPA ALIGLDLDQV IEKARAAEAA CSADSLDNPA IGLASFMYDS MLEGRDKFSL ITPKRARTFG LWIEQLVAES VGKNGKGILP NIEFDPLVLS IDHGDRTVIP YLVETPLDDE RENFQLGLDR IDPAYPRRTY EVTDVTDLFA HFVMWEYATA MVGWLMELNP FDQPDVALPK AATLDILKSG MPQPSFTETF LGGIDLGKVE VTCSPAVAAD NLHDALYNLF ASIEPGDYFA FDAFVPFTGD NRREALEGIR RLVASELNVV SCLELGPRYL HSTGQLQKGG TNNGVFLVVS TGEIDDIPLE GLEAASLGEL AKAQAAGDTA ILIDRGRRVV HLHLPDNAGI TLRLLEKAVT DIVFELKSGT RTGIWNA
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