Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00450 |
Symbol | |
ID | 8393937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 58671 |
End bp | 59444 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644984819 |
Product | hypothetical protein |
Protein accession | YP_003142469 |
Protein GI | 257062797 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACGG TAACGAAAGG CATACGTAAG GCGGCGACTG TCTTGATTGT CGCTGTTGCC TGCGCCCTTA TGCTTGCCGG AGCGCCTTCG GTGGCGTTTG GTGCGGATGG GGGCTTGCAG GTGAGCCAGT CGTATTCCGA GTCGGGCGAC GTTCCCGAGT CGGTAACGGG CTCGTTCGAC TACGCGCTTA CGGCTACGTC CGAGGGCGCT GCGATGCCGG AGGGTTCATC GGGCAATACG TACGCGTTCT CGCTTGACGG CGATGGCGCA TCCATCACAT TCCCCGTGCA GGGTTCGGGC CCCTATGCGC TCGTGTTCGA GCACACAGGG GTGTATTCCT ACGAGCTGAC CTGCACAAGC ACGCCAAGCG CAGACGGAAT GACCGTTGAC AACAGCACGT ACACGGTCCG CATCTGCGTG GACAACGCGG CCGATGGCGG ATTGCAGATG GGCTGGGTTG AGGTCCGTGA CGAAAACGGC GAGAAACCCG ACGAGGTCTG CTACAGCCAC TCGTTCGAGG GCGCAGAGCC TGCGCCGGGT CCGGAGCCTG AGCCCGAGCC GAGTCCGGAA CCCACGCCGA GCCCGAATCC GAAACCGGAT TCCGGCCCGT TCCACCTGCC GTTCAACTTG CCGCAGACGG GCGACCCTGT TTGGATGCTT ATCCAGATGA GCGGTGCGTT GTGCATATGC GCAATTGCAG CGCTGGTCCT GGCTGCAGCT GGGAAGCGCC GCGCCAAGGC GGCTGCTCTT AGGGACAGTC AAAGCGACAA ATAA
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Protein sequence | MGTVTKGIRK AATVLIVAVA CALMLAGAPS VAFGADGGLQ VSQSYSESGD VPESVTGSFD YALTATSEGA AMPEGSSGNT YAFSLDGDGA SITFPVQGSG PYALVFEHTG VYSYELTCTS TPSADGMTVD NSTYTVRICV DNAADGGLQM GWVEVRDENG EKPDEVCYSH SFEGAEPAPG PEPEPEPSPE PTPSPNPKPD SGPFHLPFNL PQTGDPVWML IQMSGALCIC AIAALVLAAA GKRRAKAAAL RDSQSDK
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