Gene Shel_00450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00450 
Symbol 
ID8393937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp58671 
End bp59444 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID644984819 
Producthypothetical protein 
Protein accessionYP_003142469 
Protein GI257062797 
COG category 
COG ID 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACGG TAACGAAAGG CATACGTAAG GCGGCGACTG TCTTGATTGT CGCTGTTGCC 
TGCGCCCTTA TGCTTGCCGG AGCGCCTTCG GTGGCGTTTG GTGCGGATGG GGGCTTGCAG
GTGAGCCAGT CGTATTCCGA GTCGGGCGAC GTTCCCGAGT CGGTAACGGG CTCGTTCGAC
TACGCGCTTA CGGCTACGTC CGAGGGCGCT GCGATGCCGG AGGGTTCATC GGGCAATACG
TACGCGTTCT CGCTTGACGG CGATGGCGCA TCCATCACAT TCCCCGTGCA GGGTTCGGGC
CCCTATGCGC TCGTGTTCGA GCACACAGGG GTGTATTCCT ACGAGCTGAC CTGCACAAGC
ACGCCAAGCG CAGACGGAAT GACCGTTGAC AACAGCACGT ACACGGTCCG CATCTGCGTG
GACAACGCGG CCGATGGCGG ATTGCAGATG GGCTGGGTTG AGGTCCGTGA CGAAAACGGC
GAGAAACCCG ACGAGGTCTG CTACAGCCAC TCGTTCGAGG GCGCAGAGCC TGCGCCGGGT
CCGGAGCCTG AGCCCGAGCC GAGTCCGGAA CCCACGCCGA GCCCGAATCC GAAACCGGAT
TCCGGCCCGT TCCACCTGCC GTTCAACTTG CCGCAGACGG GCGACCCTGT TTGGATGCTT
ATCCAGATGA GCGGTGCGTT GTGCATATGC GCAATTGCAG CGCTGGTCCT GGCTGCAGCT
GGGAAGCGCC GCGCCAAGGC GGCTGCTCTT AGGGACAGTC AAAGCGACAA ATAA
 
Protein sequence
MGTVTKGIRK AATVLIVAVA CALMLAGAPS VAFGADGGLQ VSQSYSESGD VPESVTGSFD 
YALTATSEGA AMPEGSSGNT YAFSLDGDGA SITFPVQGSG PYALVFEHTG VYSYELTCTS
TPSADGMTVD NSTYTVRICV DNAADGGLQM GWVEVRDENG EKPDEVCYSH SFEGAEPAPG
PEPEPEPSPE PTPSPNPKPD SGPFHLPFNL PQTGDPVWML IQMSGALCIC AIAALVLAAA
GKRRAKAAAL RDSQSDK