| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00430 |
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| Symbol | |
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| ID | 8393935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 56669 |
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| End bp | 57739 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644984817 |
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| Product | sortase B QVPTGV class signal domain-containing protein |
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| Protein accession | YP_003142467 |
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| Protein GI | 257062795 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03065] sortase B signal domain, QVPTGV class |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.837208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA GGAAGATCGC AGCAACGCTC GCGCTGTCGG CAGCGCTGGC ACTCGGTTTC
GCGCTGCCCG CGTTCGCAGC CGATGCGGAT TATGGGGTTG GCGACGAGAC GGACAAGACC
GTTACCGCCG ACGCTGCCGC GGTGACGAAA GTCCTGCACT CCAACGAGGG CTCCACGGTG
ACGGCCACGT TCAGTTTCAC CGCAACGGGC ACTACGGTGG CTATTGACGA TGAGGGCACT
GTCTCCGAAC CCACTGATGG CCTCGGTGTA ACCATTGCGT CTGTTGAGCT GACTACTGCT
GGAGACGGCG AGGATGTTTC TGGCACGGGC AAAATCACGT TTCCGGCTTA CACGCACGCG
GGTGTGTATG CTTACATGAT TGAAGAGGCT CAGCAGGCAA CGATTGTCAA TGACGATGGT
TCTGAGGGGA CGATGACCTA CAGCACCGAT AAGTATCTCA TGCGTGTTTA TGTCGAAAAC
GAGGATACAG GTGTTGCCAT CAAGGCAGTC ACGTTTGAGA AGAACCCGAG CGCAACCTCC
AATGGCGAGA AGGTTGATGG CGGAGACGTC AAGTTTGAAA ATACCTTTGT TGAGAAGACC
GATGACAGCA GCAAGCTTAC TATCGACAAG CAGGTGACGG GCGGCTCTGG CGACAAGACG
AAAGAATGGG AGTTCACCGT TACTTTCGCG GCCCCGGAGT ATGTCCCCAC TGGTTGGACG
GTTAATGACA TCGTCATGGT CGGCGATGCA ACCGGAACCG TCGCTGATGG CAAGGTAACC
TTCAAGCTGA CGCATGGCCA GTCCGTCAAC TTCACGAACG TCGTGGCTGG TACGACTTAC
ACCGTAACCG AGACCGAGTC TGGCAAAGAC GGCTATACCA CGACTGGTGA AGTCACGACT
GCCACTGTAG TTTCCGACAA GGGCCCCAAC ACTGCAACCA TCACCAACAA CAAAGAGCCC
ATCACCCCGA CCGGTCTGGT GCTGAACAAC GCTCCGTTCA TCCTGATGGC TCTGGTTGCC
GTCGGTGGCG TTGTTGCTTA CGGTGCCCTC AAGCGTAAGC TGACGGCATA A
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| Protein sequence | MKFRKIAATL ALSAALALGF ALPAFAADAD YGVGDETDKT VTADAAAVTK VLHSNEGSTV
TATFSFTATG TTVAIDDEGT VSEPTDGLGV TIASVELTTA GDGEDVSGTG KITFPAYTHA
GVYAYMIEEA QQATIVNDDG SEGTMTYSTD KYLMRVYVEN EDTGVAIKAV TFEKNPSATS
NGEKVDGGDV KFENTFVEKT DDSSKLTIDK QVTGGSGDKT KEWEFTVTFA APEYVPTGWT
VNDIVMVGDA TGTVADGKVT FKLTHGQSVN FTNVVAGTTY TVTETESGKD GYTTTGEVTT
ATVVSDKGPN TATITNNKEP ITPTGLVLNN APFILMALVA VGGVVAYGAL KRKLTA
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