| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00410 |
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| Symbol | |
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| ID | 8393933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 51684 |
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| End bp | 55904 |
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| Gene Length | 4221 bp |
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| Protein Length | 1406 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644984815 |
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| Product | conserved repeat protein |
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| Protein accession | YP_003142465 |
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| Protein GI | 257062793 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02543] Listeria/Bacterioides repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0351044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTCG TGCTGGCCCT CAGCCAGGTG CTTGTGGCTC CGATTGCTGG CGGTGTCGCC
GTTGCCGGCG ACGAGCCGGC GGATGTCGTT CTGGAGCAGA ACGTGGAAAC TCCTGAACAG
GCCGTGGTCG CAGAGACCCC TGATGCTGTG GTTGGGGAGG AGTCCGATGC GGCCGAATTC
GGCAATTCCG AAGCGACCGA GCCTGAAGCC CAGACCGCAA CTGATGAAGA AGCCCTCGAG
CAGCCGGCCG AAGAGGTAAC CGTCGATAGC GAAACCGATA CAGCCGACGA GGTTGCCTAT
CCTGCCCAGA CTATTTCGGC TACGGCCGAT GACGAGAAGA CCGTCGTTAC CGTAACGGCG
GACGAAGGCG TGCTTCCCGA AGGCGCCACC GTCCAGGCCA AGGTTGTTGA CGACCAGGCC
GTTCTGGATG CGGTTGCCAA CGAAGTAGAA AACGATGGCG GCAAGCCCGG TCTCGTGAAG
GCGTACGACG TCGTCATTCT GGATGCAAAT GGGAATGAAG TACAGCCCCA AGGACTGCTT
ACCGTGATGT TCGCCAACGC GAACATGGAG ACGGATAGCG TGTCCGTCTA TCACGTGAAG
GACGTGTCGG ACGAATCCGA GCCGCCGATG TACGAGGCCG AAGGCGTGGT CGCCATGAAG
GCCGAAGCCA ACGAGCAGGT CTTCGAAACC GACCACTTCT CCATTTATGC AGTGGCCGAA
GACAACAAGA TCCGTTTGAA GGTGCAGTTC TTTGGCAAGG ATCAGAATGC CGAAGTGGCC
TCGATGCTGC TGAAGAAATC CGAAACGGCT GCCGATATCG AGAAAATCGT TTACGACCCG
GGTGCGGGCG AATTGGCCGA AGGCGAATTG TTCCGCGGCT GGACTACGGA TCCGAACTAT
AACGCCGATA CCCAACCCAT GGACATCGAA GCCGTGCGCA ATCTGGCTGC GCAGCGTGCC
GCTGCGCTGG GCGAGGATAA CACCGAGCTG AAGTTGTACG CCATGATTAT GAAGAGCGCG
ACCGTTACCT ATGTGGATGA GAACGGCATC GCGCTGGGTT CGACCACCAA GGAACAGCGT
TACGACGACA GCACCCCCAT GGATTACACC GTGAACATGG CCTACACGCC GCCGACGTCC
GAGCAGGACT TCGAAGGCTG GAACGTGTTG AGCGGTGAAT CGAACATCGT GGGCCATACG
GATGGCAAGG TGTATGAGAA CGGCACGAAC ATCAAGGTGA CCGGAGACGT GACGTTCTCG
GTGAACGCAC CCACGGGCCG TTGGCTGGTG TTCGACGAAA ACGGCAAAGG CGCCACGTAC
AATTCACCCC AGTTCGTGAA GTCGGGCGAG GTTACGGAAG AACCGCCGCT TGAGATGCAT
CGTACCGGCT ACGAGTTCAA AGGCTGGTAC ACCGATGCAG CATGTACGGC TGGTAACGAG
TTCACCTTCG GACAGACGCT GACAAACAAC ACGACCATTT ATGCTAAGTG GACGCCGGTC
TCTAACGCGC AGTACACGGT CATCATTTGG AAACAGAACG TAGCCGGCGA CGGATACGAC
TTCGAAGAGT CCATCCAGCT GACTGGCAAC GCCAACGCTA ATGTGAATGC GGTTGTATCG
CATGGTACTG GCAACAACGC ATATGTGACC GTAGATGGGG ACGCTAAGTC ATATACGGGC
TTCCACCTGA AAGAGTTCGA TCAGAATGTA ACCATCGCTC CCGAAGGCAA TACGGTCGTA
AACGTCTACT ACGACCGTAC GGAGTACACG TTTACGTTCC AGGTCCGACA GTCTGGATGG
GTCGTAGCGA CCGATAATGA AGGAACCCAG TATCGTAACC GAAATTGGGA TCGCGTCTAT
TTCAACGAAG ACGATGGAAA GTGGTATCGA GACCGAAGCT GGGTTGGTGG ATACTATTCG
GGGCATTGGG TCTATTCTAA CGAATATACG GGCACTCGCT ATAAATACCT CGATAACGAT
TGGACAACCA TCCATACCGT GACACGGCCG TATGGGGCTG ACATCGGCGA CATTTGGAAC
TTTACCGGCT CGAATGGCGT TACATACCCT CAAGAAGACC CGGTAACCTC GTGGCAGCCT
ACGAACTCCA GCACATATAC GGCACGTATC ACTCATATGG AGGTCATGCC TGCGGAGAGT
ATAACGTTCA GGCATACAAC GACGAGCAAT ACGAAGCGAT ACTTCCACTA TTACGTCGAG
GCTTTGCCTG GTGCGCAGGA TACGCGCACC TTTAATGGCA AGCAGTATTC CCTGTATGTG
GATTTGCCTA ACGATTTCAA CATCGTTTAT TACAACGACG ACTTCTGGGA GCTCAGGGGA
TTCACTCGCC AAGCAATTAC AAAGAGCGGT AATCAGGCCG TGGATCTCGC ACCCGGAGGT
AATATTTCTT GGGACGCTTT GAACTACTAT TACGGCGGCC AAGATAACCA CCTGTATTTC
TACTATACGC GCGACAAATA CCGCATCCAC TATATGGATG GCGTGTATGT TGACGGCGAT
GGCAGGCCGC AGGATGAGCC TGGTCAAGGA GACTTTGGCA CATCCGATGA AATCCTATAC
GGTGCTGACA TCAGCTCGTA TAACCAGGGT GGCAGCAACT ACTTCGCTCC TGAATACCCT
GAGTACACGT TCGCGGGCTG GTACATCGAC GACGCTTGCA CGCAGCCGTA CACCTTCGAA
AAGATGCCGC AAGGCGGCGT AACGGTCTAT GCCAAGTGGA CCAAGAATCA GTATCGCGTG
TTCTTGCATC CGAACGCTGG TACCGATCCG ACGTTGGATT GGGGTTCCGA TAACCAGCAG
ATGAACTTCC GCGTGTCGTC GGGCGAAAAG GTGAGCACGC CTACGGGCCT GCGCAGCGAA
TACGAGCTGG TGGGTTGGTA TCTGGATGAG GCATGCACGC AGCCGTATCC GGCTAGCTTC
GTTCTGAATG ACTCATCCGT TACCACGCCG TACGACAAGA CCACGGACAT GACGGATGTT
ATGGACAAGT GGGGCAACGG CGCCACGACC AATGCCGACG CCAATCGTCC GTGGATTACC
AAGAAGCTTG ACCTGTACGC CAAGTGGCGC GCAAAGATCG AAGGCGCGAA GGGAATCGGA
GTCGTGTACG ACGCGAACGG CGGCACGAAC GGGCCTACCG ACCCGCTGCT GTATTTGGAC
AACTCCGACG CCATCGCCCA GGCGGCGTCG ACCGCACCTG AGGGCAAGCA GTTCAAGTAC
TGGGTTGTCC AGACGTGGGA TGAAGCCGCT GGAGAATACG TGGACACCGA GACACATGTT
TACCCAGGTG ATGCGTTTAC CGTGCTGAAG GCGAATGCCA AGGTTGAAAA TGTCAGCTCG
CAAGACCCTG AGGTTTGGAA GGCGTACACG GTCCAGTTGC GCGCCGAATA TGTGGACAAG
GGGTCTCCGG AAACCACGGC GGTGTTGTTC GACGCGAACG GCGGAACGCT TTCCGATGGT
AAGACCACCG ACGAGCGTGT GCTTGAGGTT AACGGGGACG TCGAGTTCCC CACGCCCGAT
CCGACGCGCG AGGGGTACAC GTTCCTTGGT TGGAGCCCGG AGAAGGTTGA CCCTGTGACT
GATCCTTCAG AGGTTAGTAC CATTCTCGAC ACGTCCAAGG AATATGCTGC CGACAACCTG
GCGGGCCTGG CCTGGAACGC CACTGAGGGG AAGAACATCC TGTATGCCGT GTGGAAGAAG
ACCCCGGTCA AGCTGGTCAT CCAGAAAGAA CTTGAAGGCG ACATGGCAGA CCTGACGAAG
GGCTTCACGT TCACCGTGAC GCGCTCGGGC GATGGTGCCA CGGCTACGAC CGATGCGCTG
CATGACGCAC AAGGCCCGGC TGCTGCTGGC GAGACGGCAA CGGTTGAAAA CCTGACGCTC
GACTCGAAGG AAGTGCCTTT GTACTGGGGC GACAGCGTTG TGATTACCGA AACCGACACC
ACGGGCTACA CCACCACGTA CACGGTGCAG CTTGACAGCA CGACGGCAAG CGCATCTGCG
GCGTACGGCA ACGGCGCCAA GGTCAAGCTC GACGCCGACG TGACGACGGT TGTCTTCACC
AACACGAAGG AACCCGTCGT GATTACCGGA GTTAAGGCGG CTGTTAAATC GCCTATCTCA
TATGTCCTGC TTATCGGCTC GCTAATTGCT CTGCAGAGCG TCGTGCTCAC GCGGACAAGG
CGCAGGCGAT GGCAGGAGTA G
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| Protein sequence | MAFVLALSQV LVAPIAGGVA VAGDEPADVV LEQNVETPEQ AVVAETPDAV VGEESDAAEF
GNSEATEPEA QTATDEEALE QPAEEVTVDS ETDTADEVAY PAQTISATAD DEKTVVTVTA
DEGVLPEGAT VQAKVVDDQA VLDAVANEVE NDGGKPGLVK AYDVVILDAN GNEVQPQGLL
TVMFANANME TDSVSVYHVK DVSDESEPPM YEAEGVVAMK AEANEQVFET DHFSIYAVAE
DNKIRLKVQF FGKDQNAEVA SMLLKKSETA ADIEKIVYDP GAGELAEGEL FRGWTTDPNY
NADTQPMDIE AVRNLAAQRA AALGEDNTEL KLYAMIMKSA TVTYVDENGI ALGSTTKEQR
YDDSTPMDYT VNMAYTPPTS EQDFEGWNVL SGESNIVGHT DGKVYENGTN IKVTGDVTFS
VNAPTGRWLV FDENGKGATY NSPQFVKSGE VTEEPPLEMH RTGYEFKGWY TDAACTAGNE
FTFGQTLTNN TTIYAKWTPV SNAQYTVIIW KQNVAGDGYD FEESIQLTGN ANANVNAVVS
HGTGNNAYVT VDGDAKSYTG FHLKEFDQNV TIAPEGNTVV NVYYDRTEYT FTFQVRQSGW
VVATDNEGTQ YRNRNWDRVY FNEDDGKWYR DRSWVGGYYS GHWVYSNEYT GTRYKYLDND
WTTIHTVTRP YGADIGDIWN FTGSNGVTYP QEDPVTSWQP TNSSTYTARI THMEVMPAES
ITFRHTTTSN TKRYFHYYVE ALPGAQDTRT FNGKQYSLYV DLPNDFNIVY YNDDFWELRG
FTRQAITKSG NQAVDLAPGG NISWDALNYY YGGQDNHLYF YYTRDKYRIH YMDGVYVDGD
GRPQDEPGQG DFGTSDEILY GADISSYNQG GSNYFAPEYP EYTFAGWYID DACTQPYTFE
KMPQGGVTVY AKWTKNQYRV FLHPNAGTDP TLDWGSDNQQ MNFRVSSGEK VSTPTGLRSE
YELVGWYLDE ACTQPYPASF VLNDSSVTTP YDKTTDMTDV MDKWGNGATT NADANRPWIT
KKLDLYAKWR AKIEGAKGIG VVYDANGGTN GPTDPLLYLD NSDAIAQAAS TAPEGKQFKY
WVVQTWDEAA GEYVDTETHV YPGDAFTVLK ANAKVENVSS QDPEVWKAYT VQLRAEYVDK
GSPETTAVLF DANGGTLSDG KTTDERVLEV NGDVEFPTPD PTREGYTFLG WSPEKVDPVT
DPSEVSTILD TSKEYAADNL AGLAWNATEG KNILYAVWKK TPVKLVIQKE LEGDMADLTK
GFTFTVTRSG DGATATTDAL HDAQGPAAAG ETATVENLTL DSKEVPLYWG DSVVITETDT
TGYTTTYTVQ LDSTTASASA AYGNGAKVKL DADVTTVVFT NTKEPVVITG VKAAVKSPIS
YVLLIGSLIA LQSVVLTRTR RRRWQE
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