Gene Shel_00370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00370 
Symbol 
ID8393929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp46040 
End bp47329 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content62% 
IMG OID644984811 
Producthypothetical protein 
Protein accessionYP_003142461 
Protein GI257062789 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.799337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGG TACTGCTGAT TCCGACGTAC GTGTCGGCGC GTTCGCGCAT GCAGGCGCGG 
GGCGTCACCA CTACGTATGA CCATATGACT GCGCTTTCGG CACCGGGCGA GCTGCCCCGT
TGCCTGGAAT CGCTGCGCAA AGTGCGCGGT TTGGGCGAAA TCATCATCCT GGTGGTGGCC
GAGCCCGCCG TGGAGAACCA GGCCGCGGAG AAGATCCGCA AGCTGGCGGC GGAGTATGAC
GACCTGAGCA TCTCCGTCAT CGGCGCGCCC GAGATGGGCG TCATCAACCA GCGCATGGCC
CAGCTGGGCA TCAACGTGAA CAAGGAAATC GGCCTGCAAG GTTATGGCGC CGTGCGCAAC
CTGGGGTTGC TTTTGGCTAA CGCCCTGGGT TTCGACGCGG CCGTGTTCGT GGACGACGAC
GAAATCGTGG ACGACGAGGA CTTCCTGGAG CGCGCCATGT ACGGCCTGGG CAAACTGACC
CGCCGCGGCG TGCCTATTCT GGCCAAAACC GGCTACTACC TCAACGAGCA GGAAAGCTTC
CTTTCGCAAA GCCAGGACCG CTGGTACAAC CACTTCTGGG AGCAGGGCAA AACCTTCAAC
CAGTGGATCA TGAAAGCCAT GAAGGGACCG CGCCTGTCCC GTTCGAACCA CGTGTGCGGC
GGCTGTCTGG CCCTGCACAA GGAGGCTTTC AAGCGCGTGG CCTTCGACCC GTGGATTGCC
CGCGGCGAGG ATCTGGATTA CATGCTGAAC CTGCGCATGT ACGGTTCGGA CATCTGGTTC
GACAACAAGT GGGTGCTGCA CCATCTGCCG CCCGCGACCA AGTCCGAAGG CATGCGCTTC
CGCCAGGACA TCTTCCGCTG GCTGTATGAA TTCCGCAAGG TGGAATACGC CCGCACGCAG
ATCGACCTGA TGCAGATCAA GCCTCAGTCC CTTGAGCCCT ATCCGGGACC GTTTTTGGAG
CCTGGCCTGC AGAAACGTGT GAAACGAACA GCGCTGTTGC GCTCCATCGG CCGCTCCGAC
GGCAAGGGCT ACCGCAAGGC CGCTCACTCG GCGTCCACCG ATGCGGCCAA GTACGCCGAG
GACAACTGCG CCAAGTATTT CAAGTTCCAG TACACCTGGC CCACCATCAT GGCGCGCCTG
GAGGACGACG CCATTTTGAA GAGCGTGCTG GGGCAGTCGG CCAACCAGGG CCAGGCCCGC
TTCGAGGAGC AGGTGGCCAA GGGTTGGAGC GGCGGCGTTG ATCCCGGCAT GACCAGCGAG
ATTCGCCTGA ACATCGGGTC GGAGGAATAG
 
Protein sequence
MNPVLLIPTY VSARSRMQAR GVTTTYDHMT ALSAPGELPR CLESLRKVRG LGEIIILVVA 
EPAVENQAAE KIRKLAAEYD DLSISVIGAP EMGVINQRMA QLGINVNKEI GLQGYGAVRN
LGLLLANALG FDAAVFVDDD EIVDDEDFLE RAMYGLGKLT RRGVPILAKT GYYLNEQESF
LSQSQDRWYN HFWEQGKTFN QWIMKAMKGP RLSRSNHVCG GCLALHKEAF KRVAFDPWIA
RGEDLDYMLN LRMYGSDIWF DNKWVLHHLP PATKSEGMRF RQDIFRWLYE FRKVEYARTQ
IDLMQIKPQS LEPYPGPFLE PGLQKRVKRT ALLRSIGRSD GKGYRKAAHS ASTDAAKYAE
DNCAKYFKFQ YTWPTIMARL EDDAILKSVL GQSANQGQAR FEEQVAKGWS GGVDPGMTSE
IRLNIGSEE