Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00370 |
Symbol | |
ID | 8393929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 46040 |
End bp | 47329 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644984811 |
Product | hypothetical protein |
Protein accession | YP_003142461 |
Protein GI | 257062789 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.799337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCCGG TACTGCTGAT TCCGACGTAC GTGTCGGCGC GTTCGCGCAT GCAGGCGCGG GGCGTCACCA CTACGTATGA CCATATGACT GCGCTTTCGG CACCGGGCGA GCTGCCCCGT TGCCTGGAAT CGCTGCGCAA AGTGCGCGGT TTGGGCGAAA TCATCATCCT GGTGGTGGCC GAGCCCGCCG TGGAGAACCA GGCCGCGGAG AAGATCCGCA AGCTGGCGGC GGAGTATGAC GACCTGAGCA TCTCCGTCAT CGGCGCGCCC GAGATGGGCG TCATCAACCA GCGCATGGCC CAGCTGGGCA TCAACGTGAA CAAGGAAATC GGCCTGCAAG GTTATGGCGC CGTGCGCAAC CTGGGGTTGC TTTTGGCTAA CGCCCTGGGT TTCGACGCGG CCGTGTTCGT GGACGACGAC GAAATCGTGG ACGACGAGGA CTTCCTGGAG CGCGCCATGT ACGGCCTGGG CAAACTGACC CGCCGCGGCG TGCCTATTCT GGCCAAAACC GGCTACTACC TCAACGAGCA GGAAAGCTTC CTTTCGCAAA GCCAGGACCG CTGGTACAAC CACTTCTGGG AGCAGGGCAA AACCTTCAAC CAGTGGATCA TGAAAGCCAT GAAGGGACCG CGCCTGTCCC GTTCGAACCA CGTGTGCGGC GGCTGTCTGG CCCTGCACAA GGAGGCTTTC AAGCGCGTGG CCTTCGACCC GTGGATTGCC CGCGGCGAGG ATCTGGATTA CATGCTGAAC CTGCGCATGT ACGGTTCGGA CATCTGGTTC GACAACAAGT GGGTGCTGCA CCATCTGCCG CCCGCGACCA AGTCCGAAGG CATGCGCTTC CGCCAGGACA TCTTCCGCTG GCTGTATGAA TTCCGCAAGG TGGAATACGC CCGCACGCAG ATCGACCTGA TGCAGATCAA GCCTCAGTCC CTTGAGCCCT ATCCGGGACC GTTTTTGGAG CCTGGCCTGC AGAAACGTGT GAAACGAACA GCGCTGTTGC GCTCCATCGG CCGCTCCGAC GGCAAGGGCT ACCGCAAGGC CGCTCACTCG GCGTCCACCG ATGCGGCCAA GTACGCCGAG GACAACTGCG CCAAGTATTT CAAGTTCCAG TACACCTGGC CCACCATCAT GGCGCGCCTG GAGGACGACG CCATTTTGAA GAGCGTGCTG GGGCAGTCGG CCAACCAGGG CCAGGCCCGC TTCGAGGAGC AGGTGGCCAA GGGTTGGAGC GGCGGCGTTG ATCCCGGCAT GACCAGCGAG ATTCGCCTGA ACATCGGGTC GGAGGAATAG
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Protein sequence | MNPVLLIPTY VSARSRMQAR GVTTTYDHMT ALSAPGELPR CLESLRKVRG LGEIIILVVA EPAVENQAAE KIRKLAAEYD DLSISVIGAP EMGVINQRMA QLGINVNKEI GLQGYGAVRN LGLLLANALG FDAAVFVDDD EIVDDEDFLE RAMYGLGKLT RRGVPILAKT GYYLNEQESF LSQSQDRWYN HFWEQGKTFN QWIMKAMKGP RLSRSNHVCG GCLALHKEAF KRVAFDPWIA RGEDLDYMLN LRMYGSDIWF DNKWVLHHLP PATKSEGMRF RQDIFRWLYE FRKVEYARTQ IDLMQIKPQS LEPYPGPFLE PGLQKRVKRT ALLRSIGRSD GKGYRKAAHS ASTDAAKYAE DNCAKYFKFQ YTWPTIMARL EDDAILKSVL GQSANQGQAR FEEQVAKGWS GGVDPGMTSE IRLNIGSEE
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