Gene Shel_00320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00320 
Symbol 
ID8393924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp40624 
End bp41898 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content65% 
IMG OID644984806 
Producthypothetical protein 
Protein accessionYP_003142456 
Protein GI257062784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.212091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAACGC CCACCGCGCG CCGCGTTTCC GCCGAGCCGC AGCGTCGCCT CGCCATCCCC 
GGAACCAACG TGAGCCTGAC CCGCCGCCAG CTGATTCTTG GCGCAGCAGG CGTGGCCGCG
GTTGCCGCGG CGGCCGTGGG CAGCAGCATT GCGGAGGATC ACGAGGCCGA AGAGGAAAAC
GCGAACGTTT TGGAGGTCGC CGCCGACCAG GTCGTAACCC TGGACGAGTT CGAAACCCTG
GATGCCGCCG ATTGCATGGA GCAAATCGCC GAGCTGGCGC TTCCGTTCCA TTCGCTGGTT
TGGGCAGGGC CGGGCAACCT GGCTGTGTGC CTCACCCCCA CCGAAACCTC ATCCCCCATC
ACCAAGGTTG GCCTGGTCGA CCTGTCCGCT TCCGAATTGG AGCTGGTCAC GGTGCTGGAG
GGCCCAGTAT CCATCGACGC GCGCGGCTAC GACATCCTCG ACGTGCGCTG CAGCGACTCG
GGCATCGTCT GGGTGGAGGC CAATTCCTAC AGCGGCCGTT GGAACGTGTA CCACGCCACC
CTATCCGGCA CCAGCATGGG CGAGCCTACG CTGGCCGAGC AGGGCGACCG CGAATTCGAC
ATCCCGTCGG TGGCCGCCGT GGGCAACCGT GCGTTTTGGC AGGTCCTTCC CGTTTCGAGC
ACCCTCAACC CGCCCGATTC CGTTCTGAAG TCCGCCGAGT TCGGGTCTGA GGATTCCGTG
ATGGCGCTCA GCTCGCGCGG CCGCATGTGC ACGCGCCCCT ACGCCGCCAC CGAAGGCGTC
GTGGTCACGC CCCGTGCGGA CTCAAGCAGT GTGCATTACA AGTTGACCCT GGTCAACGAC
ACCACGTTCG ACGTTCTCGA CGAGCTGACC ATGCCGTCGG CCATGGCTCC GCTAGAAGCC
GCCTACGTGG GCGGACGATT CTCCTTCGCG TTCGACGCCA TTTACGATTA CGGCGACGGG
CTTTCGTCGC TGGGCACCTA CGCGCCCATC AGCAAAGGCA ACAGCACGAA AAACGCTACC
TGGTTCCTGT TCGGGCGCAA CCCGTCCGCA GCGCCGGCCT GGTCAGGCGA TTGGCTGATT
GTGAAATCCA CGCGCTCGGT CAGCGGCGTC AACTTGGAGG ACCGCACCAT GTTCGCGCTG
GATTGCCCCA GCCACTGCGA CACCTTCGGC GATTACCTCG CATCGTCCGG CACCTGCGAC
CGCATTGCCA CCTACGTGCA CATCTCCACC AACGACCAGG AGTACACCCT CCTGCGCACC
TGGCGCCCCC TCTAG
 
Protein sequence
MGTPTARRVS AEPQRRLAIP GTNVSLTRRQ LILGAAGVAA VAAAAVGSSI AEDHEAEEEN 
ANVLEVAADQ VVTLDEFETL DAADCMEQIA ELALPFHSLV WAGPGNLAVC LTPTETSSPI
TKVGLVDLSA SELELVTVLE GPVSIDARGY DILDVRCSDS GIVWVEANSY SGRWNVYHAT
LSGTSMGEPT LAEQGDREFD IPSVAAVGNR AFWQVLPVSS TLNPPDSVLK SAEFGSEDSV
MALSSRGRMC TRPYAATEGV VVTPRADSSS VHYKLTLVND TTFDVLDELT MPSAMAPLEA
AYVGGRFSFA FDAIYDYGDG LSSLGTYAPI SKGNSTKNAT WFLFGRNPSA APAWSGDWLI
VKSTRSVSGV NLEDRTMFAL DCPSHCDTFG DYLASSGTCD RIATYVHIST NDQEYTLLRT
WRPL