| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00250 |
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| Symbol | |
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| ID | 8393917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 33835 |
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| End bp | 34614 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644984799 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_003142449 |
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| Protein GI | 257062777 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA ACAAATACCA CCGCGCCAGC CGCGTATCGC GAACCTCCAC CGAGGCTGCG
AAGCACGCTT GGCTGCCCTC ACAGTTCGAG GATATTCGCA AACTCTCGCC GGCGGAAGCT
GCCCGTAAAG CCAAAAGGGT CCTGCGACCC ATTCGCGAGT ACTCGCTTGG CGAAGAGATC
TGCAACGCGC TCACCCACGG CCTTGGTGCC GTGTTGGCTA TTGCGGCCCT GGTCATCGCG
GTGGTGACGG CTGTTAGACA CGGCGGCGGC GTGCGCATCG CCGCAGCGCT CATCTACACC
ATTTCCATGT TCGTGGAGTA TCTCATGTCC ACGCTGTACC ACGCGCTGCC GGCCGAAGGG
GCCAAGCGCG TGTTCAAGGT GCTGGACCAC AGCGCCATCT ACCTGTTCAT CGCGGGTTCG
TATACCCCGT TCTGCCTGCT CACGCTGGCG CCCGACGGGG GCTACCTGTT GTGCGGCGTC
GTGTGGGGGC TGGCCATCGC CGGCATTGCG GCCGAAGCGT TCTGGACCTA CCGCCCGCGC
TGGGTCTCTG CGGTGTTGTA CCTGCTCATG GGTTGGTGCG TCGTGTGGTT CCTGCCGCCT
TTGGTGCATG CCCTGCCTAC GCCGGGCCTC ATCCTTCTGG TGGCCGGCGG CATCGCGTAC
TCCATCGGCG CAGCCTTCTA CGTGTTGAAG AAGGTCCCGT ACATGCACAC CGTGTTCCAC
GTGCTGGTGG TTGTGGGCTC GGTTCTGCAG TTCCTGGCCA TCGTGCTGTA CGTTCTCTAG
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| Protein sequence | MKNNKYHRAS RVSRTSTEAA KHAWLPSQFE DIRKLSPAEA ARKAKRVLRP IREYSLGEEI
CNALTHGLGA VLAIAALVIA VVTAVRHGGG VRIAAALIYT ISMFVEYLMS TLYHALPAEG
AKRVFKVLDH SAIYLFIAGS YTPFCLLTLA PDGGYLLCGV VWGLAIAGIA AEAFWTYRPR
WVSAVLYLLM GWCVVWFLPP LVHALPTPGL ILLVAGGIAY SIGAAFYVLK KVPYMHTVFH
VLVVVGSVLQ FLAIVLYVL
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