| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00220 |
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| Symbol | |
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| ID | 8393914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 29418 |
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| End bp | 30899 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644984797 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_003142447 |
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| Protein GI | 257062775 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0381086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGCCG ATGCCGGCGT ACAAGCCCAG GCCACGGGCG AAGCCACCGT ACAGGGCATG
ACCATCGATT CCCGCAAGGC CGAGCCGGGT TGTTTGTTCG TTTGTAAGGG CGCGGCGTTC
AAACCCCAGT ACCTGGGCGG AGCGCTTGAC GCCGGAGCTG CGGCGTACCT GTGCGATGCA
GCCGCCGAAG CCACCTTGGC GCAGGCCTAT CCGCAGGCGC CGCACATCGT GACCGACGAC
GTGCGCAGGG CCATGGCGCT TCTGGCCGCC GTGGTGTTCG ACCGGCCCGA CCTCAAGATC
GACGTGGTAG GCATCACGGG CACCAAAGGC AAGTCGACCA CAGCATATAT GATGCGCTCG
ATTCTTATCG CCGCAGGTCA GGAGCCTTCT ATTTTGGGCT CTATCGACAC TGACGACGGT
GTGGAACACT TCGAGAGCCA CAACACCACT CCCGAGGCAC CGGATTTGTG GCGCCACCTG
GCCAACACCG TCGAAGCCGG CCGCAGCCGC ATGGTGATGG AGGTGTCTAG CCACGGCTTG
AAATACGACC GCACGCTGGG CGTTCGCTTT GCCATCGGGT GCTTCCTCAA CATCGGGCGC
GACCACATCT CGCCAGTCGA GCACCCCACC TTCGAGGACT ACTTCGAGTC CAAGCTCAAG
CTGTTCGCCC AAAGCCGCAC GGCCCTGGTC AACCTGAATT CCGACATGGC CGACCAGGTG
CTGGAAGCCG CGAAGGCCTC CGAGCAGCTG GTCACTTTCG GCGTGGGGCG CGATGATGCC
GACTGGAACG CGGCGGACTT GGCCGTGGAG CCGCAGGGCA TCGCGTTTAC CGTGTGCACG
CCCACAGGCG AGCGCGAGCG CATCGTGCTG GGCATGGCGG GTCTGTTCAA TGTCGAAAAC
GCCCTGGCTG CGGTGGTCAT GAGCCGTATG CTAGGTGTGA CCTGGGACGA TATCCGCGCA
GGCTTGGCCC ATGTGCGCGT GCCCGGCCGT ATGGAGGTCG TGCGCTCCGC CGACGGCAGC
GTGGTGGCGC TGGTTGATTA TGCCCACAAC GAGCTGTCGT TCAAGACCTT CTTCTCGTCG
GTTAAGGAAG AATACCCTGG CCGCAAGGTG ATTGCGGTGT TCGGTGCGCC TGGCAACAAG
GCCCAGGAGC GGCGTGTGAC GTTGCCCCGG GTGGCGGCCG GGTTTGCCGA CCATATGATC
TTTACCGAGG AAGACCCCGC CTATGAGCGG GTAGAAGACA TCTGCGCCGA GATGATGGCG
AGCACGCCCG CGGGCGCTTC CGCCGAGGTG ATCTGCGACC GCGAGGCCGC GTGCAAGCGC
GCCTTCGACA TGGCGTTTGA GGCTGAAAAC GGCGCCGTGG TGGCGCTTCT GGCCAAGGGC
GACGAAACCC GCCAGCATCG CGGTGACGAG TTTCCCGAGG TCAAGAGCGA CCTTGCCATC
GCACGTGAGA TTCTAGGCAG CACCGGGGAG GTGGATGCGT AA
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| Protein sequence | MLADAGVQAQ ATGEATVQGM TIDSRKAEPG CLFVCKGAAF KPQYLGGALD AGAAAYLCDA
AAEATLAQAY PQAPHIVTDD VRRAMALLAA VVFDRPDLKI DVVGITGTKG KSTTAYMMRS
ILIAAGQEPS ILGSIDTDDG VEHFESHNTT PEAPDLWRHL ANTVEAGRSR MVMEVSSHGL
KYDRTLGVRF AIGCFLNIGR DHISPVEHPT FEDYFESKLK LFAQSRTALV NLNSDMADQV
LEAAKASEQL VTFGVGRDDA DWNAADLAVE PQGIAFTVCT PTGERERIVL GMAGLFNVEN
ALAAVVMSRM LGVTWDDIRA GLAHVRVPGR MEVVRSADGS VVALVDYAHN ELSFKTFFSS
VKEEYPGRKV IAVFGAPGNK AQERRVTLPR VAAGFADHMI FTEEDPAYER VEDICAEMMA
STPAGASAEV ICDREAACKR AFDMAFEAEN GAVVALLAKG DETRQHRGDE FPEVKSDLAI
AREILGSTGE VDA
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