| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00200 |
|---|
| Symbol | |
|---|
| ID | 8393912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 27635 |
|---|
| End bp | 29029 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644984795 |
|---|
| Product | pyruvate formate-lyase activating-like enzyme |
|---|
| Protein accession | YP_003142445 |
|---|
| Protein GI | 257062773 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.158297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGGGGT CGAAATCGAA AAAGCGCAGC AAGAAGAGCC GCGGCACCGC ATCGCGTCCG
ACGCCGCGCC GGCAGCAGCT TACGCCTGCG ACCACGGTTG CCCACATCCC GCTGGAGCTT
CCCGAACCCG CGCCCGACAA CCCGCCGCTG AACGAATGGA TCGTTCGATA TCTGACCATC
TACCAGGAGT ATCTGATCGG AGCCGCAAAC AAGGGCGTCG AATTCGGCGA GCCCTACCAG
CATGACGACG CCTGCCGCGA GGTCAAGGAG CGCCTGCGTG AAAAGGGCGT CACCTTCCGC
AACGGCGAAG CCAGCATCGT GCATGGCGAC ATCTCCACCG CATGCATCGC TTGCACCGGC
GGCGACAGCC AGTCGTTCTT CTACTCATTG CGCTGCCCTA AGAACTGCTT CTTCTGTTTC
AACCACAATC AGAATAACTA CGCCGGTTAC TTGGACGACG ACCGCGATTG GCGAAGCGAA
CTTGCCGCCA TTATGGAAGC GGGCCGACCC ATGACGCATT TGGCCCTGAC CGGCGGCGAG
CCGCTCATGA GGCCCGACGA GGCGTGCGCT TTTTTCGAAA TAGCCCGCGC GAACTGGCCC
GATGCGCATC TGCGGCTGTA CACGTCGGGC GAAGGTCTCA CCCGCGAGAT TATGGAGCGT
CTGGTGGCGG CGGGCATGAA CGAGATTCGC TTCAGCATCA AGCTGGATGT GGACACGATT
CTTACTCCGC AGGACTTCGA GTTCATCCGC ATGTCCTGCG AGTTCCCAGT CAGCACCATG
GTGGAAATGC CCGTCATGCC TGGCACGTTC GACCAGATGA CAGGCATTTT GCGCGAACTG
GACGCCCTGG GCGCTTTCGG CATCAACCTG CTGGAATTCT GCTATGCCAA GCACAACTGG
CCTGAGTTCG CCAAGCGTGG CTTCAAGGTG AAGAACCCGC CGTTCACGGT TCTTTACGAC
TGGGGTTATG CGGGGTCACA CCCTATCGAG GGAAGTGACC TAGAGTGCCT GAGGTTGTTG
GAATACGCCG CTGACCAAGG GCTGCGCCTA GGCGTGCACT ACTGCTCGCT GGAAAACAAA
CACCGCGACC AGGTGTACCA GATGAACCAC ATGGCGCCGT TCTCGAACCC GTGCTTCGCC
ATGGACGACG GCGATTTCTA TTGGAAGACA TGCAAGGTGT TCGGCGCCGA TGTGGCGCCC
GTGCGCCGGC TGCTGGAATC CGTCGACGCC GCTGGCCGCC TGTGGAGCTA CGACGCCGAA
GATGATTGCC TGGCGTTCAA CTCGCAGCTG CGCGACCGTG TGCTCGAGCT GCCCGTTCGC
GTCATGACTT CGGCGAACAT CCTGGTCAAA TACCCCGAAG GTGTCATGCT TCGCGAACTT
GGCCTTTTCG ATTAA
|
|---|
| Protein sequence | MAGSKSKKRS KKSRGTASRP TPRRQQLTPA TTVAHIPLEL PEPAPDNPPL NEWIVRYLTI
YQEYLIGAAN KGVEFGEPYQ HDDACREVKE RLREKGVTFR NGEASIVHGD ISTACIACTG
GDSQSFFYSL RCPKNCFFCF NHNQNNYAGY LDDDRDWRSE LAAIMEAGRP MTHLALTGGE
PLMRPDEACA FFEIARANWP DAHLRLYTSG EGLTREIMER LVAAGMNEIR FSIKLDVDTI
LTPQDFEFIR MSCEFPVSTM VEMPVMPGTF DQMTGILREL DALGAFGINL LEFCYAKHNW
PEFAKRGFKV KNPPFTVLYD WGYAGSHPIE GSDLECLRLL EYAADQGLRL GVHYCSLENK
HRDQVYQMNH MAPFSNPCFA MDDGDFYWKT CKVFGADVAP VRRLLESVDA AGRLWSYDAE
DDCLAFNSQL RDRVLELPVR VMTSANILVK YPEGVMLREL GLFD
|
|---|
| |