Gene Shel_00190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00190 
Symbol 
ID8393911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp27057 
End bp27500 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID644984794 
Producthypothetical protein 
Protein accessionYP_003142444 
Protein GI257062772 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.348868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACG ACGAACTGAA GGAACTGATT AAAGACGCCA TGCGCGCGAA GGATAAGGTG 
CGCCTGTCCA TCCTGCGCCA GCTTTCGGGC GAGATCAAGA ACATCGAGGT GAACGAGCGT
CGCGAGATCA CCGAGGCCGA CGTCGACGCC ATGACGAAGC GCCTGATCAA GCAGACGAAA
GAAACCCTGG AAGGTTCCGA AAAGGCCGGC ACCGACCAGG AGCGCACCGA CAATCTGCGC
AGGCAAGTTG AGATTCTGGA AGAGCTGCTG CCCGAGCAGG TCTCTGGCGA GGCGCTGGAC
CAGCTGATTA CGAAGACCCT GGCAGAGGTG GGCGCAACCA CCAAGCGCGA TATGGGCAAG
GTCATGGGCG CGTTGACCAA GCAGACCGGC GGAAACTTCG ACAAGTCCGC AGCCGCCGCC
AAGATCGGCA AACTGCTGTC GTAG
 
Protein sequence
MQYDELKELI KDAMRAKDKV RLSILRQLSG EIKNIEVNER REITEADVDA MTKRLIKQTK 
ETLEGSEKAG TDQERTDNLR RQVEILEELL PEQVSGEALD QLITKTLAEV GATTKRDMGK
VMGALTKQTG GNFDKSAAAA KIGKLLS