Gene Shel_00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00160 
Symbol 
ID8393908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp23142 
End bp23918 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID644984791 
Product6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase 
Protein accessionYP_003142441 
Protein GI257062769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR00502] glucosamine-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA TCGTCACCAA GGACGCCGAA GAGACCCGCG AAGCCGTCGC CGACGCCATT 
ACGGATCAGA TTGCCGAAAA CCCGGGTTCG GTGCTGGCGC TGTCCGCGGC TCCCGAAGCC
TTGGCGGTTT ACGACGTGCT CGCTGATCGA TATGAGTCCG AGGCATTGGA CTTCTCCCGT
CTGGCCGTCT TCAACCTGGG CGAATACTGC GGCGTGCAAG CAACCGACGC CGATAGCGTG
TATACCGCCA TGCGCCGCCA CCTGTATGAC CACGTCAACA TGAACCCCGA GCATGCCTAC
GTGCCTGAAG GCATGAACGA CGATGCCGCC GCCGTTTGCG ACGGCTACGA GGCCCGCATC
CACCTTGAAG GCGGTATCGA CCTGGTCGCG CTGCCGTTGG GCTCCGCCGG CGAGCTGGGC
CTGAACGTCG GCGGCACCGA GTTCTCCAAA GAGACCCTGC TGGTAGAGGA ACCCCGTCCT
GCGTACACCA TGGGCGTCGG CTCGATTATG GAGGCCGACC AGGTGGTCGT GTTCGCCAAC
GGCTCCGACA TGGCGGATAT CGTGCGCGAC GCGTTCTTCG GGCCGATCAC CCCGGCGGTG
CCGGCGTCTA TTCTGCAATT CCACCCCGAT ACGACGGCCA TCGTCGACGA GGCGGCCTTC
GAATCCTGCT TCGACCTGGT CGAAGGCGAC GACTGCGATT GCGGCTGCGA CGATGACGAA
TGCTGCCACG GCGAGCATCA CCGCAACGGC GAGTGCTGCG GTAAACAACA CCACTAG
 
Protein sequence
MQIIVTKDAE ETREAVADAI TDQIAENPGS VLALSAAPEA LAVYDVLADR YESEALDFSR 
LAVFNLGEYC GVQATDADSV YTAMRRHLYD HVNMNPEHAY VPEGMNDDAA AVCDGYEARI
HLEGGIDLVA LPLGSAGELG LNVGGTEFSK ETLLVEEPRP AYTMGVGSIM EADQVVVFAN
GSDMADIVRD AFFGPITPAV PASILQFHPD TTAIVDEAAF ESCFDLVEGD DCDCGCDDDE
CCHGEHHRNG ECCGKQHH