Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00160 |
Symbol | |
ID | 8393908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 23142 |
End bp | 23918 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644984791 |
Product | 6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase |
Protein accession | YP_003142441 |
Protein GI | 257062769 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCA TCGTCACCAA GGACGCCGAA GAGACCCGCG AAGCCGTCGC CGACGCCATT ACGGATCAGA TTGCCGAAAA CCCGGGTTCG GTGCTGGCGC TGTCCGCGGC TCCCGAAGCC TTGGCGGTTT ACGACGTGCT CGCTGATCGA TATGAGTCCG AGGCATTGGA CTTCTCCCGT CTGGCCGTCT TCAACCTGGG CGAATACTGC GGCGTGCAAG CAACCGACGC CGATAGCGTG TATACCGCCA TGCGCCGCCA CCTGTATGAC CACGTCAACA TGAACCCCGA GCATGCCTAC GTGCCTGAAG GCATGAACGA CGATGCCGCC GCCGTTTGCG ACGGCTACGA GGCCCGCATC CACCTTGAAG GCGGTATCGA CCTGGTCGCG CTGCCGTTGG GCTCCGCCGG CGAGCTGGGC CTGAACGTCG GCGGCACCGA GTTCTCCAAA GAGACCCTGC TGGTAGAGGA ACCCCGTCCT GCGTACACCA TGGGCGTCGG CTCGATTATG GAGGCCGACC AGGTGGTCGT GTTCGCCAAC GGCTCCGACA TGGCGGATAT CGTGCGCGAC GCGTTCTTCG GGCCGATCAC CCCGGCGGTG CCGGCGTCTA TTCTGCAATT CCACCCCGAT ACGACGGCCA TCGTCGACGA GGCGGCCTTC GAATCCTGCT TCGACCTGGT CGAAGGCGAC GACTGCGATT GCGGCTGCGA CGATGACGAA TGCTGCCACG GCGAGCATCA CCGCAACGGC GAGTGCTGCG GTAAACAACA CCACTAG
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Protein sequence | MQIIVTKDAE ETREAVADAI TDQIAENPGS VLALSAAPEA LAVYDVLADR YESEALDFSR LAVFNLGEYC GVQATDADSV YTAMRRHLYD HVNMNPEHAY VPEGMNDDAA AVCDGYEARI HLEGGIDLVA LPLGSAGELG LNVGGTEFSK ETLLVEEPRP AYTMGVGSIM EADQVVVFAN GSDMADIVRD AFFGPITPAV PASILQFHPD TTAIVDEAAF ESCFDLVEGD DCDCGCDDDE CCHGEHHRNG ECCGKQHH
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