| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00140 |
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| Symbol | |
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| ID | 8393906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 21130 |
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| End bp | 22116 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644984789 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| Protein accession | YP_003142439 |
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| Protein GI | 257062767 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACG TGCGCGTGTT CTCGCCGGCC AAGGTGAATC TGCATCTTGA TATCAGCGAG
CGCCGGCCGG ACGGCTACCA TGGGGCTTAT TCCATCATGC ATGCGCTGTC GATGCACGAC
ATGCTGACCA TGCGCCGTGA GTTTGCGGCG CCGGGCTCGG GCTTGGTTGT GGATGTGCAT
TGCGCCACCC ATGGCGATAT TGCTGAGCTG AACATTCCCG CAGAATCGAA CATCGCTTAC
AAGGCCGTCG TCCGTCTTGC CGAGGCTCTT GGACGGACTG GGGATGATTC CGTTCTGATA
GGTATCGACA AGAACATTCC CCATGCGGCG GGGCTAGGCG GCGGTTCGTC AAACGCCGCT
GCAGCGCTGC TGGGTGCCTG TGCGCTATGG GATATAGACT TGGCCGACAC TGGTGTTCGC
GCGATCGTGG AGCAGGTGGC ATCAGGATTG GGTGCCGACG TGCCTTTCTT CCTGCACGGC
GGGTGCGTGG CCCTTACCGA TAAGGGCGAC ATATACGAGC GTGACCTGGT GCCTAGCAAA
CGCAACGTGG TCATTGTGCG GCCTGAGGAG GGTGTTTCCA CCGGCGCTGC CTATGCGGCA
TTCGACGCGA ATCCGCCTCT GTCCAGCGAC GAGGTCAAAG CGGACGCCCG TGCGGCTGAA
TCCGCCGACG ACCTGCATCT TTTCAACAAC CTGGCTCCCG CTTCCGAAGG CCTGCTGCCG
GTTCTGACCG ATATTCGCGA GTGGTTGTCG GGCCATGCGG GCGTAGCGCA TGATGCAACC
ACAGGTGCGC CCCAGGTCCT TCTGTGCGGC AGTGGTTCGT CCACCTTCGC CATCTGCGAC
GACTTCGATG CGGCCTACAA GCTTGTGGGT GACGCTCGAT TGAACGGCTG GTGGGCCCGC
AGCTGCAATT TCACCAGCGC AGGAGCGCGC GTGCTGCCCA CGGCGGGTCA GGCCACCAAC
CTTGGTGCCG TGCAAAAGTC CTGGTAG
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| Protein sequence | MNHVRVFSPA KVNLHLDISE RRPDGYHGAY SIMHALSMHD MLTMRREFAA PGSGLVVDVH
CATHGDIAEL NIPAESNIAY KAVVRLAEAL GRTGDDSVLI GIDKNIPHAA GLGGGSSNAA
AALLGACALW DIDLADTGVR AIVEQVASGL GADVPFFLHG GCVALTDKGD IYERDLVPSK
RNVVIVRPEE GVSTGAAYAA FDANPPLSSD EVKADARAAE SADDLHLFNN LAPASEGLLP
VLTDIREWLS GHAGVAHDAT TGAPQVLLCG SGSSTFAICD DFDAAYKLVG DARLNGWWAR
SCNFTSAGAR VLPTAGQATN LGAVQKSW
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