| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00130 |
|---|
| Symbol | |
|---|
| ID | 8393905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 20615 |
|---|
| End bp | 21133 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644984788 |
|---|
| Product | tRNA-adenosine deaminase |
|---|
| Protein accession | YP_003142438 |
|---|
| Protein GI | 257062766 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCG TATTCGAACA ATCCGCAGAC GAGAAACTCG AGGACGACGA GCGCTTCATG
CGCGCAGCTA TCGAGCAGGC GCATCTTGCC GAGTTGGACG GCGAGGTGCC GATCGGCGCC
GTGGTCGTTT GCCAAGGTGA AATCATCGCC GAGGGACGCA ATCATCGCGA GACCGACCAG
GACCCTTCGG CCCATGCCGA GTTCAGCGCC ATTATGCAGG CGTCCCGCGA GCTGGAGCGA
TGGCGTCTTC CCGACTGCAC GGTCTATGTC ACGCTGGAGC CCTGCATCAT GTGCTCGGGG
CTTATGCATC AGGCCCGTAT CGGCCGCTGC GTCTACGGCG CCCCCGACCC CAAAGCCGGC
GCGCTGGGCA CGTTGTACCA GGTACACGCC GATGAGCGGC TTAACCACAC CTTTGAGGTG
ACCTCAGGTG TGCTGCAAGA CGAATGCGCC CGTCTGCTGA AAGATTTTTT CGCGCGCAAG
CGCAGCCAGA AAAACATGAG CGGAAGGAAA CTCCAATGA
|
|---|
| Protein sequence | MEPVFEQSAD EKLEDDERFM RAAIEQAHLA ELDGEVPIGA VVVCQGEIIA EGRNHRETDQ
DPSAHAEFSA IMQASRELER WRLPDCTVYV TLEPCIMCSG LMHQARIGRC VYGAPDPKAG
ALGTLYQVHA DERLNHTFEV TSGVLQDECA RLLKDFFARK RSQKNMSGRK LQ
|
|---|
| |