Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00100 |
Symbol | |
ID | 8393902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 18719 |
End bp | 19237 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644984785 |
Product | putative cell wall binding protein |
Protein accession | YP_003142435 |
Protein GI | 257062763 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCCGT ACCAGCCGCT GGCTACCAGC ATCAACCTGT ACGGCACCAA GGTGCTCGAG GGCCGCGACC TTAAGGCCGG CGAGTTCTCC TTCACCCTGA CGGACGACAA GGGCAACGTG CGCAAGACCG TGACCAACGC CGCTGACGGA AGCATCGACT TCGGCATGCT GCTCTTCGAG CACGAAGGCA CCTACACCTA CACCGTGGCT GAGGTCAAGG GCGACGACTC CACGATCACC TACGACGAAT CTGTCAAGAC CTTTACGGTC GAGGTTGTGG ACGAGGGCGG CCAGCTGGTC GCAACCGCGA GCTGCGAGGA CGGCGAGAAG GCAGTGTTCA CCAACAAGTA CACTGCTCCT GAGCCCGATC CGACTCCGGA TCCGAAGCCC AAACCCGAGC CTGAGAAGCC TGTGATTCCG AAGACCGGCG ACGACACCCC GATCACCGGC CTGGGCATCC TGGCTGTGGC AGCCGTCGCT GTGATTGGCG TGGCAGCCCG CCGCAAGAGC CAGCTGTAA
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Protein sequence | MNPYQPLATS INLYGTKVLE GRDLKAGEFS FTLTDDKGNV RKTVTNAADG SIDFGMLLFE HEGTYTYTVA EVKGDDSTIT YDESVKTFTV EVVDEGGQLV ATASCEDGEK AVFTNKYTAP EPDPTPDPKP KPEPEKPVIP KTGDDTPITG LGILAVAAVA VIGVAARRKS QL
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