Gene Shel_00100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00100 
Symbol 
ID8393902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp18719 
End bp19237 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content63% 
IMG OID644984785 
Productputative cell wall binding protein 
Protein accessionYP_003142435 
Protein GI257062763 
COG category 
COG ID 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCGT ACCAGCCGCT GGCTACCAGC ATCAACCTGT ACGGCACCAA GGTGCTCGAG 
GGCCGCGACC TTAAGGCCGG CGAGTTCTCC TTCACCCTGA CGGACGACAA GGGCAACGTG
CGCAAGACCG TGACCAACGC CGCTGACGGA AGCATCGACT TCGGCATGCT GCTCTTCGAG
CACGAAGGCA CCTACACCTA CACCGTGGCT GAGGTCAAGG GCGACGACTC CACGATCACC
TACGACGAAT CTGTCAAGAC CTTTACGGTC GAGGTTGTGG ACGAGGGCGG CCAGCTGGTC
GCAACCGCGA GCTGCGAGGA CGGCGAGAAG GCAGTGTTCA CCAACAAGTA CACTGCTCCT
GAGCCCGATC CGACTCCGGA TCCGAAGCCC AAACCCGAGC CTGAGAAGCC TGTGATTCCG
AAGACCGGCG ACGACACCCC GATCACCGGC CTGGGCATCC TGGCTGTGGC AGCCGTCGCT
GTGATTGGCG TGGCAGCCCG CCGCAAGAGC CAGCTGTAA
 
Protein sequence
MNPYQPLATS INLYGTKVLE GRDLKAGEFS FTLTDDKGNV RKTVTNAADG SIDFGMLLFE 
HEGTYTYTVA EVKGDDSTIT YDESVKTFTV EVVDEGGQLV ATASCEDGEK AVFTNKYTAP
EPDPTPDPKP KPEPEKPVIP KTGDDTPITG LGILAVAAVA VIGVAARRKS QL