| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00050 |
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| Symbol | |
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| ID | 8393897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 4673 |
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| End bp | 6619 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644984780 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_003142431 |
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| Protein GI | 257062759 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000300089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00265407 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAGAGA AGCAATCGAG CCATTACGAC GCCGGCGACA TTCAAGTCCT CGAAGGGCTC
GAAGCGGTAC GTAAGCGTCC TGGCATGTAC ATCGGCTCAA CCGGCACGCG CGGCCTGCAC
CACCTCGTTT ACGAGGTTGT CGACAACGCC GTTGACGAGG CTTTGGCCGG ATACTGCACG
AAAATCGACG TCATCATTCA CGAAGACAAC TCCATTACGG TCATCGACAA CGGCCGCGGC
ATCCCCGTGG AGAAGCATCC CAAAGAGAAG ATTCCTACGG TCGAGGTTGT TTTGACCATC
CTGCATGCCG GCGGCAAGTT CGGCGGCGAG GGCTATAAGG TTTCCGGCGG CCTGCACGGC
GTCGGCGTCT CCTGCGTGAA CGCCCTGTCC ACGCGCTTGG AGGTCGAAGT CTGCCGCGAC
GGCAAGAAAT ACGGCATCGC CTTCTCCCGC GGCAAGACCG TCGAGAAGCT GCATCAGATC
GGCACGTCGA AGACCACCGG CACCACGGTC ACCTTCTGGC CCGACCCGGA AATCTTCACG
GACACGCTGG TCTACGACTA CGAAACCCTG CAGGAGCGCT TCCGCGAGAT GGCATTCCTG
AACAAAGGTC TGCGCATCGA GCTCACCGAC GAGCGCCAGC AGGACGAAGA GGGCAACTTC
AAGCATGAGA CCTTCAAGTA CGACGGCGGC ATCGTCGACT TCGTCAAATA TTTGAACCAG
GGTAAGGAAA CTCTCAACAA GCCCATCTAC TTCGAGGCGG AAAACGCCGA CGGTACGGTG
GAAGTCGTCA TGCAGTGGTC CACGAGCTAC GGCACTAACG GCATTATGGC CTTCGCCAAC
AACATCAACA CCCATGAGGG CGGCACCCAT CTGGACGGTT TCAAGAACGC GCTGACCCGT
ACCATTAACG ATTACGCGCG CTCGAAGGGC CTGCTCAAGG AGAAGGATAA GAACCTGACC
GGCGACGACG CCCGTGAAGG CCTGGCCGCC ATCATCTCCG TCAAGCTGCA TGACCCCCAG
TTCGAGGGCC AGACGAAGAC CAAGCTAGGC AACGTAGAAA TCCGCGGCCT GGTGCAGGGC
GCCGTCACCA AGGGCTTGTC CGAATATCTG GAAGAGAACC CGACGCCCGC CAAGCGCATC
GTCGGCAAGG CTTCCCAGGC CTTGAAGGCC CGCGAAGCAG CCCGCAAGGC CCGCGAAATG
ACCCGCCGCA AGGGTGTTCT CGACAGCTTC AGCATGCCTG GCAAGCTGGC CGACTGCTCC
AGCCGCGAAC CGGCCCTGTC CGAAATGTTC ATCGTCGAGG GTGACTCGGC AGGCGGCTCC
GCCAAGCAGG CTCGCGACCG CAAATACCAG GCAATCCTGC CCCTGCGCGG CAAGATCCTG
AACGTGGAGC GCGCCGGTTT GCACCGCGCC CTGTCGAGCG ACACCATTTC CAGCCTGATC
ACGGCCATCG GTACGAACAT CGGCGACGAT TACAACGGCG ACAACGCCCG CTACCATCGC
ATCATCATCA TGACCGATGC TGACGTCGAC GGCGCGCATA TCCGCTGCCT GCTGCTCACG
TTCTTCTACC GTTACATGCC CGACCTGATC AACCGCGGCT ACATCTACAT CGCGCAGCCG
CCGTTGTACG GCCTGAAAAA GAAGAACTCC GCATCCGGCA AGATCCTTAA ATACATCTAC
AACGATGAGG CAAAAGACCA GATCATGGCC CAGCTCGAGG ATCCGGACAA GTATGACATC
CAGCGCTACA AGGGTCTGGG CGAGATGGAC CCCGAGCAGC TGTGGGAAAC CACCATGGAG
CCCGAAACCC GCACCCTCAT CCAGGTGAGC ATCGAGGACG CCGCCGCTGC CGAGCGCGCA
GTGTCCGACC TGATGGGCGA CGATGTGGAA CCCCGTAAGG AATTCATCCA GAAGAACGCG
CTCGACGTTC GCTTCCTGGA CATTTAA
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| Protein sequence | MAEKQSSHYD AGDIQVLEGL EAVRKRPGMY IGSTGTRGLH HLVYEVVDNA VDEALAGYCT
KIDVIIHEDN SITVIDNGRG IPVEKHPKEK IPTVEVVLTI LHAGGKFGGE GYKVSGGLHG
VGVSCVNALS TRLEVEVCRD GKKYGIAFSR GKTVEKLHQI GTSKTTGTTV TFWPDPEIFT
DTLVYDYETL QERFREMAFL NKGLRIELTD ERQQDEEGNF KHETFKYDGG IVDFVKYLNQ
GKETLNKPIY FEAENADGTV EVVMQWSTSY GTNGIMAFAN NINTHEGGTH LDGFKNALTR
TINDYARSKG LLKEKDKNLT GDDAREGLAA IISVKLHDPQ FEGQTKTKLG NVEIRGLVQG
AVTKGLSEYL EENPTPAKRI VGKASQALKA REAARKAREM TRRKGVLDSF SMPGKLADCS
SREPALSEMF IVEGDSAGGS AKQARDRKYQ AILPLRGKIL NVERAGLHRA LSSDTISSLI
TAIGTNIGDD YNGDNARYHR IIIMTDADVD GAHIRCLLLT FFYRYMPDLI NRGYIYIAQP
PLYGLKKKNS ASGKILKYIY NDEAKDQIMA QLEDPDKYDI QRYKGLGEMD PEQLWETTME
PETRTLIQVS IEDAAAAERA VSDLMGDDVE PRKEFIQKNA LDVRFLDI
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