Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_00040 |
Symbol | |
ID | 8393896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 3986 |
End bp | 4510 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644984779 |
Product | Protein of unknown function (DUF721) |
Protein accession | YP_003142430 |
Protein GI | 257062758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000149562 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000555635 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAGGT TGCAACCGTT CAGTCAAACC ATGGGAACCA CTATGCGCGA CCTCATTGGG TCCAGCGAGG CCGCCCGCAA GGCTGCCCGC GCAGCCCAGG TGAAGGAGAT GTGGCGCGGT TTGGTGGAGC CGGTGTTCCT GGAGCATACC AATGCCGTTT ACATCATCCA GGAGGAAAAC GAAAAAGTCC TGGTCGTATA CGTGGATTCC AGTATCTTCG CCGCAGAACT CAATGCCCGC CGCGAGCTGA TAAAGATGGA ACTGGCGGGC AAATACCATG AAGTGGTGGA TGAGTTCCGC ATCATAATTT CCCGCGGTCC TTATAAGAAC AACCATCCTT TTATAGAAGA GAAACCCGAG CTTCCCACCG CCGACGTGGA ACCGATTCCC TTGGATGAAA CTCAGATCAA AGCAATAGAA AAACAAGCTT CGGTTATAGA AAACGCAAGG CTCAGACAAG CTTTGATTAA GGCCATGATT TCCGATTTAG AACTCAAAAA CGGAATCAGG AATCAAAACA ACTAA
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Protein sequence | MARLQPFSQT MGTTMRDLIG SSEAARKAAR AAQVKEMWRG LVEPVFLEHT NAVYIIQEEN EKVLVVYVDS SIFAAELNAR RELIKMELAG KYHEVVDEFR IIISRGPYKN NHPFIEEKPE LPTADVEPIP LDETQIKAIE KQASVIENAR LRQALIKAMI SDLELKNGIR NQNN
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