Gene Shel_00040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00040 
Symbol 
ID8393896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3986 
End bp4510 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content50% 
IMG OID644984779 
ProductProtein of unknown function (DUF721) 
Protein accessionYP_003142430 
Protein GI257062758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000149562 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000555635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAGGT TGCAACCGTT CAGTCAAACC ATGGGAACCA CTATGCGCGA CCTCATTGGG 
TCCAGCGAGG CCGCCCGCAA GGCTGCCCGC GCAGCCCAGG TGAAGGAGAT GTGGCGCGGT
TTGGTGGAGC CGGTGTTCCT GGAGCATACC AATGCCGTTT ACATCATCCA GGAGGAAAAC
GAAAAAGTCC TGGTCGTATA CGTGGATTCC AGTATCTTCG CCGCAGAACT CAATGCCCGC
CGCGAGCTGA TAAAGATGGA ACTGGCGGGC AAATACCATG AAGTGGTGGA TGAGTTCCGC
ATCATAATTT CCCGCGGTCC TTATAAGAAC AACCATCCTT TTATAGAAGA GAAACCCGAG
CTTCCCACCG CCGACGTGGA ACCGATTCCC TTGGATGAAA CTCAGATCAA AGCAATAGAA
AAACAAGCTT CGGTTATAGA AAACGCAAGG CTCAGACAAG CTTTGATTAA GGCCATGATT
TCCGATTTAG AACTCAAAAA CGGAATCAGG AATCAAAACA ACTAA
 
Protein sequence
MARLQPFSQT MGTTMRDLIG SSEAARKAAR AAQVKEMWRG LVEPVFLEHT NAVYIIQEEN 
EKVLVVYVDS SIFAAELNAR RELIKMELAG KYHEVVDEFR IIISRGPYKN NHPFIEEKPE
LPTADVEPIP LDETQIKAIE KQASVIENAR LRQALIKAMI SDLELKNGIR NQNN