| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00030 |
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| Symbol | |
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| ID | 8393895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2840 |
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| End bp | 3970 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644984778 |
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| Product | recF protein |
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| Protein accession | YP_003142429 |
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| Protein GI | 257062757 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000612951 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000132668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACATCC GGATCGAGTC GTTCCAGCTG CGGGACTTTC GCAATTACGA GACGTTCCGT
CTGGATGGCA TTGGGCCGCT GACTATTTTC ATCGGTCCGA ACGGAATAGG GAAGACAAAC
GTGCTGGAGG CAATCCAGCT GCTGACGGCC ACGCCGTCGT TTCGTCATGC TCACACCCAG
GAGCTGATCA GGTGGGATGC GGAAAATTCT TTGCTGAAGG CCCATATGGT GTCGGATGTT
CGCGACCTGG AAATAGGCCT TGCCATCGGT CCGACCGGGA AAACCTATAG CATCAACGGC
AAGAAACATT CGGGACAGGA CGTTCAGACC ACGCTGCCTT CCGTCGTGTT CTCGCCTGAC
GACATGCTGC TCCTGAAAGG CTCGCAGTCC TATCGCCGCG ACGAGCTGGA TGCGGTGGGA
TGCCAGCTGT CCAAAAACCA CCGCATCCTG AAGCGGGACT ACCTTAAACT GATGAAACAT
AAGAACGCCC TGCTCAAGGA CGGGGTGACG GGACCTTACA TCGAAAGTGT CAACGATCTG
ATCGTGCCGA CGGCCACGCA GCTTTATCTA TATAGAGTTG CGTTGTTTAA AAACATCGCG
GCCCGCATGG CGGAGGTATA TGCAACCATT TCCGCAGGTG GCGAACGTCT TGAGATGCGC
TACATCCCAT CGTGGCATCC GATGGAAGTA TCGAAGGATG TTATCGAGGA CGTCCCATTC
GACCTGGGTA AACAGGAGAT TTCAACCCGT CTTGAAGAGG CGCTGCACCA GCGTGCCGTC
GAAGAGTACG AACGGGGCAG AGGGCTTGTC GGCCCCCATG CGGATAAGAT CATGTTCTAT
CTGAACGGGC GCAACGCGTC TTTGTACGGC TCGCAGGGCC AGCAGCGGTC TATTTCCCTG
GCATGGAAGA TTGCCGAAGT GGGTCTGATT GAAGAGATCC TCGGCCAGAA ACCCGTTCTG
CTGCTGGACG ATGTGGCCAG CGAATTGGAC GCCGCGCGCC GCGGGGCGTT GGTCGAGCTT
CTGCATCGTG ATATCCAAAC CTTCATCACC ACTACGGATA TCGGCACATT CGAAAGCGAA
GTGGTTGACG AAGCCAGCGT GGTGAATATG CTTGAACTCA GGAATAAATA A
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| Protein sequence | MDIRIESFQL RDFRNYETFR LDGIGPLTIF IGPNGIGKTN VLEAIQLLTA TPSFRHAHTQ
ELIRWDAENS LLKAHMVSDV RDLEIGLAIG PTGKTYSING KKHSGQDVQT TLPSVVFSPD
DMLLLKGSQS YRRDELDAVG CQLSKNHRIL KRDYLKLMKH KNALLKDGVT GPYIESVNDL
IVPTATQLYL YRVALFKNIA ARMAEVYATI SAGGERLEMR YIPSWHPMEV SKDVIEDVPF
DLGKQEISTR LEEALHQRAV EEYERGRGLV GPHADKIMFY LNGRNASLYG SQGQQRSISL
AWKIAEVGLI EEILGQKPVL LLDDVASELD AARRGALVEL LHRDIQTFIT TTDIGTFESE
VVDEASVVNM LELRNK
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