| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00010 |
|---|
| Symbol | |
|---|
| ID | 8396747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 42 |
|---|
| End bp | 1547 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644984776 |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_003142427 |
|---|
| Protein GI | 257062755 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000175242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000074483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTA CCGACCTCTA CGCAACGTGG AACAGCGTCT GTAACCAAAT AAAGACATAC
GGCGATGTGA ATCCGCATCA GGTAGATGCG TATTTCAGCA GGCTGCACCC CCAAGCGATT
TCCGAGGGGT TCCTCGTGCT GACTGCCGAT ACCGCATTCT TCAAGATGCA GGTGGAAAAA
CGTTATCTGA CCCATATCAT CCAGGCGTTG AAGGACACCA CCGGCATCGA CTTCATGGTG
GAAATCGAAG TGGACGAAAC TGAACCGGCT CCGCAGCCCG TCGTGGTGCA GCAACCAGTC
TTCGAACCCC AACAGGATGT CGGCTTGTTC CCAGGACAGC CCATTTCCAC CCAGCTGGTT
ACGGAAACCG AGCCCCAACC CTCGTGTCTG ACGGGTGAGG GAAGCGAAGC CATGATGGAA
GAGGAAATCG CGCGAAGCAA GGCCGCAACC TTGGCCTCGT CGCTGACTTT CGAAAGTTTC
GTCACGGGCA ACTCTAACAT GTTGGCTTAC TCGTTGGCGG TAGCTGTTGC CGAAGCCCCA
GGTCAGCCCA ATACAAATCC GCTGTTCATC TACGGTAAGT CTGGTCTGGG CAAAACGCAT
TTGCTGCGCG CTATTCAGAA TTATGTGATG GAAACCAATC CCACTATGGA CGTCGTGTAC
ATCGACTCCT CGGAGTTTCT GGCCGAGTAC ACCTCGGCGG TTACCGCCCA CGAGCGCGAC
AGGAAGAGCT TCCAGAACTT CCAGAACCGT TTTTTGGACG CGGACATGCT TCTGATCGAC
GACGTTCAGT TCTTCCAAGG TAAATCCGCC ACGCTGGATA TTGTGTTCCA GCTGTTCAAC
CACCTGGTTG ATGCCGGCAA GCAGGTGGTG CTGTCCGCCG ACCGCGCCCC GAAGATGATC
GACATCGACG AGCGTTACAA GAGCCGCTTC AACCAAGGCG CCACGGTCAA CGTCGATCCA
CCCGAACTGG AAGTGAAGCT GGGCATCATC AAAAACTTCA TCAACGAGTA TGAAGCCACT
TCGGAAAGCG GCCCGCTTAA CATCCCCGAC GACATCCAAA TCTACATCGC GGAAATTTCC
AGCTCCAACG TACGCGAGCT GAAGAGCGCC GTAACCAAAG TCATCTTCCA GATCCGCTAT
TCGGATTCGG GCGAAATAAC CTTGTCCGAG GTGAAAACCC TGCTCGAAGA CCATTTCTCA
TCTGGCATCA CAAAGCGTTT GAACATCGGC ATGATTCAAC ACGAAGTGGA GCAGTACTAC
AAGGTGACCC ATGCCGAACT GATAGGCGTT AAACGGTCTA GAAACATCGT TTTCGCACGT
CAGGTGGCAA TTTATCTCTG CCGCAATATG CTTGACATCC CTTACGCCGC CATCGGCAAG
AAGTTCGGAC AGCGCGACCA TTCCACCATC ATGCACTCCG TCAAGCTCAT CGAGGACCGC
ATGAGGTCGA GCCGCGAGAT GCAGGAAGAG ATCGAAATCA TCACCAAGAT GATTAGGGAA
AGCTAG
|
|---|
| Protein sequence | MDITDLYATW NSVCNQIKTY GDVNPHQVDA YFSRLHPQAI SEGFLVLTAD TAFFKMQVEK
RYLTHIIQAL KDTTGIDFMV EIEVDETEPA PQPVVVQQPV FEPQQDVGLF PGQPISTQLV
TETEPQPSCL TGEGSEAMME EEIARSKAAT LASSLTFESF VTGNSNMLAY SLAVAVAEAP
GQPNTNPLFI YGKSGLGKTH LLRAIQNYVM ETNPTMDVVY IDSSEFLAEY TSAVTAHERD
RKSFQNFQNR FLDADMLLID DVQFFQGKSA TLDIVFQLFN HLVDAGKQVV LSADRAPKMI
DIDERYKSRF NQGATVNVDP PELEVKLGII KNFINEYEAT SESGPLNIPD DIQIYIAEIS
SSNVRELKSA VTKVIFQIRY SDSGEITLSE VKTLLEDHFS SGITKRLNIG MIQHEVEQYY
KVTHAELIGV KRSRNIVFAR QVAIYLCRNM LDIPYAAIGK KFGQRDHSTI MHSVKLIEDR
MRSSREMQEE IEIITKMIRE S
|
|---|
| |