Gene Apre_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1845 
Symbol 
ID8368752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand+ 
Start bp108488 
End bp109150 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content30% 
IMG OID644984768 
ProductABC transporter related 
Protein accessionYP_003142419 
Protein GI256821220 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.115233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA TCGAAGTAAA AAACATGAGT AAAAATTTTA AAAACAAGAA GCTTTTTAAT 
AATTTTTCTC TAGAAATTGA AGCTAATACA GTCCATGCCC TTGTTGGTCC TAATGGATCT 
GGCAAGACTT CTCTGCTTAG GATACTTACT GGTCTCTATG AAGAAGATGG TGGCGAAGTT 
AAGATTAAGG GAAGTCATGC AATGTTACTT GAAAATGACT ATTTGTATGA AGATAAGTCA 
GGACTTGAAA ATATAAAATT ATACGGTTTG TATTTTGGAT ATGGTCTAGA TAATTATCAA 
AAATATTCTG ACTTGCTAGA AATTACAAAT GATCTTGGTA GAAATGTTTC GACATATTCT 
AAGGGTATGA AGAGAAAATT ATCTTTATTA ATTATTATAA TGATGAATAG AGAGATAATA 
TTTTTAGATG AGGTAACTAG TGGAGTAGAC CCAATCTCAA GGGTCGAGAT AAGAAAGCTT 
ATTAAGCTTC TAAAAGATGA GGGTAAAACA ATAGTAATTA CCAGCCATGA TCTTTCTGAA 
ATTGAAAAGA TTGCTGATAA GGTTTCTATG ATAAAATCAG GAGAGTTACT TTTTACAAAG 
AATATTGGAG AAATTAAGGG AGAGAGCTTA GAAGATTTAT TTATAGAGGA AGGTACAAAA 
TGA
 
Protein sequence
MNVIEVKNMS KNFKNKKLFN NFSLEIEANT VHALVGPNGS GKTSLLRILT GLYEEDGGEV 
KIKGSHAMLL ENDYLYEDKS GLENIKLYGL YFGYGLDNYQ KYSDLLEITN DLGRNVSTYS 
KGMKRKLSLL IIIMMNREII FLDEVTSGVD PISRVEIRKL IKLLKDEGKT IVITSHDLSE 
IEKIADKVSM IKSGELLFTK NIGEIKGESL EDLFIEEGTK