| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1840 |
|---|
| Symbol | |
|---|
| ID | 8368747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013164 |
|---|
| Strand | + |
|---|
| Start bp | 103643 |
|---|
| End bp | 105418 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 644984763 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003142414 |
|---|
| Protein GI | 256821215 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.301494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGG ATAAAATAAA TCATCTTGAA TGTATAAAAA TAGCATTCAA GATGATTTAT
GAAACAGATA AAAAGTCTTT TGCGATCATT ATTATATTGT CAATTGCAAG TGGTATTTTT
CCTTTTTTAG TACTTAGATT AGGACAGACA ATAGTTAATA TAATTCAAGT TCATTCTATT
AAATTTGATA TCATTATAAG GCTTATATAT ATATATTTAT CTTTACAATT TATATCTATA
ATAGTAGATA ATATTAAAAA TTACTATTTA CAAAGATTGA GTAATGAAGT TATTTATTCT
TCCATGAGCA AAGTAATGGG AAAATGTGCT GATTTACCTT TAAAAAAGCT TGAAGATAAT
AAAACTTATG ATATTTTGAA TAGAATAGAG CAGGATGCTA CATTAAAGCC ATATGAAATA
TTAATGGCGG TTATAGGTTT ATTTTCTAGT TTGACACAGA CTATTATAGC CATATATGTA
TTAATTAAAT GGAATTATTA TCTGGTTCTT CTTTTGTTTG TAGTTACCAT TGTATCAGTA
TTTGGAGAAA TAAGAATAGG TAAATTAGAG TTTAATATTA GAAATAGAAG GAGTAATTTA
GAGAGGAAAA GTTGGTATTA TTCTTTTTTA TTAACCCATG ATATTGCTTT TAAGGAGATC
AAAACTTTTA GGTTGAAAAA TTATTTTCTT AATAAGTATA CAGAAATAAC AGATACTATT
ATTAATCAAA ATAATAGCAT TGAAAAATTG AAAGCTATAT TAATAATTGT TATAAATTTT
ATTCAAATTC TTATTAATAT ATATATATTT AAAGAACTTG CATTTAAAAC GTATAATGGA
GACTTTTTAA TTGGAACAGC TATGATGTAT ATAAACACAA TTGCTATATT TCAAGGTTCT
CTTAATGAAA CAGGAACTAG TGTATACAAT ATTATTAATT CAAATTTATA TATAAATTTA
CTTAAAGAGT TTCTTGAATT TAAAACTGAC GATTTAAAAG AAGAGACAAA AACTATACTA
AGATCAATAA AAGACATTAA TGTAATATCG TTATCTAATA TAAACTTTTC TTATGATGAT
AATAGTTTAG CTCTGCAAGA CATTTCTTTA AAGATAAAAA AAGGAGAATC CATTGCAATA
ATTGGGGAAA ATGGTTCAGG AAAAAGTACA CTTCTAAAAA TTTTAGCTGG ATTGTATAGT
CCAGATTCAG GTGTGTTTTT AATTAATGGG ATGAAATTTG ATGATATTGA AATAGAATCT
TATAGAACAC AGATTAGTTC ATTATTTCAA GATTATTTGA AATATGAGGG GACAATAAAA
GAGAATATTA TATTAGGGCA AATTGATAGA AATGAAGACG ACTTTTCGAT TCTAACAGCA
TTAAATAGTG CTGATGCAAA ATTTTTAAAA AATGATGGTA AATATAATAT TAATAAAGTA
GTAGGTAATT GGTTTGAAAA TGGGCAGGAA CTTTCAGGCG GACAATGGCA AAAAATTGCA
ATAGCACGAA CTATGTATAG AAAATCAAGT CTATTGTTAT TTGATGAGCC AAGCTCGTCA
TTAGACATAA TTTCTGAAAA AATCATATTT GATAATATTT TAAATAATTT GAATGATAAG
ATTATTATAT ATATCACCCA TAGGATAAGA TGTGCGATGA ATTCTGATAG AATTATTGTG
ATGGATAATG GAAAAATAGT AGGTGATGGG AGTCACGATG ATTTAATTGA AAACTGTAAT
AGATATAAGT TAATGTATAA TAAGGAATTT AAGTGA
|
|---|
| Protein sequence | MGKDKINHLE CIKIAFKMIY ETDKKSFAII IILSIASGIF PFLVLRLGQT IVNIIQVHSI
KFDIIIRLIY IYLSLQFISI IVDNIKNYYL QRLSNEVIYS SMSKVMGKCA DLPLKKLEDN
KTYDILNRIE QDATLKPYEI LMAVIGLFSS LTQTIIAIYV LIKWNYYLVL LLFVVTIVSV
FGEIRIGKLE FNIRNRRSNL ERKSWYYSFL LTHDIAFKEI KTFRLKNYFL NKYTEITDTI
INQNNSIEKL KAILIIVINF IQILINIYIF KELAFKTYNG DFLIGTAMMY INTIAIFQGS
LNETGTSVYN IINSNLYINL LKEFLEFKTD DLKEETKTIL RSIKDINVIS LSNINFSYDD
NSLALQDISL KIKKGESIAI IGENGSGKST LLKILAGLYS PDSGVFLING MKFDDIEIES
YRTQISSLFQ DYLKYEGTIK ENIILGQIDR NEDDFSILTA LNSADAKFLK NDGKYNINKV
VGNWFENGQE LSGGQWQKIA IARTMYRKSS LLLFDEPSSS LDIISEKIIF DNILNNLNDK
IIIYITHRIR CAMNSDRIIV MDNGKIVGDG SHDDLIENCN RYKLMYNKEF K
|
|---|
| |