| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1821 |
|---|
| Symbol | |
|---|
| ID | 8368729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013164 |
|---|
| Strand | + |
|---|
| Start bp | 78821 |
|---|
| End bp | 79804 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 644984745 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142396 |
|---|
| Protein GI | 256821197 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2253] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGT TCTATATAAA AAATAAAGAA GATCTAAGGA TTTTAATAGT AAACACTGCT
AGAAAGAAAA ATATATCTGA AGCAGTCATT GAAAAAGACT ATTGGGTTAC TTTTATCTTA
GACTATCTAT TTAATGAAAA TAAATGGAAA GAATATTTTA CTTTTAAGGG TGGAACATCA
CTTTCAAAAT GTTTTGGACT CATTGAAAGA TTTTCTGAAG ATATAGATCT AATCTTAGAT
TGGCGAGTAT TAGGATATGA AGAAAAAGAA CCGTGGTTAA AAAGGTCAAA TACCAAGCAA
GATAAATTCA ACAAAGCAGT TAATGAAAAG ACAGAAGTAT TTTTAAGAGA TGAATTTTTA
AAAGTCTTAG AACAAGATTT AAAGGACATG AACTTTGAAT TTTCCATAGA TACAATAGAC
CCACAAACAA TTCTATGTAA ATATCCTAAA ATCTTTGAAT CTAATTATTT GACACAAAAT
ATAAGACTTG AAATAGGAAG CCTTGCAGCA TGGACACCTG CAATTGGAGT TAAAATTTCA
CCAACAATTA GTGAAGCATA TCTAAATGTA TTTAAAGAAA AAACTAATAT AAGAACAGTG
TCAGCAGAGA GAACTTTTTG GGAAAAGGCA ACTATACTTC ATCACGAAGC AAATAGACCA
GAAGCTTCTC CTATGCCACA TAGGTATGCA AGACACTTTT ATGACCTATA TAAAATATCG
AAGTCAGATT ATAAAAATAA AGCTCTGGGT GATAAAGATT TATTAAAAAA AGTGACTGAA
TTTAAAATGA AATTCTACCC TAGAAAGTGG GCAAGGTATG AAGAAGCATT AAATGGTAGA
TTAAAGTTAG TTCCAAGAGA GTACCGATTT TCTGAAATAG AAAAAGATTA TAAGGCTATG
TCAGAAATGA TTTATGGAGA CTATCCAAAC TTTGAAGAGA TTATAAAAGT TCTTAAAGAA
CTAGAAAAAG AAATTAATAA GTAG
|
|---|
| Protein sequence | MNKFYIKNKE DLRILIVNTA RKKNISEAVI EKDYWVTFIL DYLFNENKWK EYFTFKGGTS
LSKCFGLIER FSEDIDLILD WRVLGYEEKE PWLKRSNTKQ DKFNKAVNEK TEVFLRDEFL
KVLEQDLKDM NFEFSIDTID PQTILCKYPK IFESNYLTQN IRLEIGSLAA WTPAIGVKIS
PTISEAYLNV FKEKTNIRTV SAERTFWEKA TILHHEANRP EASPMPHRYA RHFYDLYKIS
KSDYKNKALG DKDLLKKVTE FKMKFYPRKW ARYEEALNGR LKLVPREYRF SEIEKDYKAM
SEMIYGDYPN FEEIIKVLKE LEKEINK
|
|---|
| |