Gene Apre_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1816 
Symbol 
ID8368724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand
Start bp72862 
End bp75441 
Gene Length2580 bp 
Protein Length859 aa 
Translation table11 
GC content31% 
IMG OID644984740 
ProductNLP/P60 protein 
Protein accessionYP_003142391 
Protein GI256821192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AACTAAAAAA AGATTTTCAA AAGAAAATTA TACGAAATAG GGACGCTCCT 
GAAAAGAATC TTGAAAGTAA ACTTGTTCAT TCAGATGATT ATACCAATAA GATTATTAAG
ACTAAGGATA GGTTCGGAGA TAAAATTTCA GAAAAGGAAT CTAAACTTAT TCATGAGAAT
GTATTATCCA AAGATCAAAA ACAAGATAAA CTAAAAGATT TTCAGAAGGC TAAAAACAAG
GAAAGAATTA GAAAAGAAGT TTTAGATAAT AAGGATAAGG CTAACGAAGT TAAACAGACT
AATCTTGAAA TAAGGACAGA TGAAAGCTTT AAACTTGATG AAGGCTTAGA TGTAGACTTC
AAAAAGGTAA ATTTTGATAG TGAAAACAGT AAAGATATTA ATTCTACTAA ACTAACAACA
TATGATATTT CAGCTAAGGC TCAACCAATA AGCAATAAGA AGGCATCAAG TAGAAGACAA
GTTTTTAAAA ATTATGAGGA TAAAATTATC CATAGTAAGG ATAAATTCCA AGACAAAATC
AACGAGAAAG AGTCTAAGCG AATCCACACA AGTGAAGATA AACCTATTGA ATCAAAGAAA
AGCAAGAGAA TATACAAAAA AGATAAGCTT GTTAAAGATG AAGTAAGTAA GAACGACAGT
AATTCTAATA TCGATAAAAA GCAAAAGCAG AAGCTTTATC AAGAAAAGAA GTTTAGAGAT
AAGGAAAAAA TTTCTAAAGA AATAGATAAA GAAAGTAAGC TAAGCCAAGT TGATACAGAT
AAGACTTTTG ATAATTCTGA GCTTAAAGAC AATAATCTTG AATTTATAAA AGATGAAAAG
GAAGCTAGCC TTAAACTTTC AGAACAAAAG AAAGTTAATA AAAAGAAGAC TTACTACAAG
AGAAAAAATT ATGAAAGTGA TAAATTCACT CGAAAGAAAA TTGATAACTT AAAAAATGAA
TCTAAGAAAG TTACAATGAA AGATTCTAAG AAGGCACAAG ACGTTAAAGA CTTTATCTCA
GATAAAAAGA TTGGAGAACT TGAAAAGTCT AAAAGCAAGC TAAAGGATAA TATCTTAAAT
AATAAAACTA AAGGAAGTCT ATCTTCTGGG GTTTTATTAT CTGGAGCTAA GTCTTCAGAG
CTAGTGAGAG ATTATCTAAG TTCAGGATCT GACAATACTG GTGTAGAATC TGGAGAAAAG
GTCGCTAATG TAAGCTCTAA ACTCCAGCAT GGAATAAGGA AGTATAAGTT AGACAAAAAG
AAAAAGTCCT TAAAAAAGCT ATCTAAACTT GATAAGAAAA TAAGAAAGAG AAAAAGCAAG
TTGGAGTTTA AAAGTGGCTT GGAAGATTTA AAAAAGTCAG ACGCCTATAT CAAGAAAAAT
AGATTTAAGA AGTTTTATCA AAGAAAACAA ATGAAAAGCA TGATAGCTAA AAAGCACGAA
ACAAGACTTG TAGATAGAGT TAAAAAAGCT ATTTTAAGTT TAGGTAAGGC TTCTAAAGAG
CTAATCATAA GAAAAAGCAA GATGGTTCTA TTTCTAGTAA TAGGACTAGG TCTTATGCTA
TCAATCATGA TTGGTGGTGG AAGTGTTGGC ATGAGTGGTC TAAGCAACTC AGTAAACTCA
GTAATGACAA CAACATACCT ATCACAAGAT ACAGTTCTAA GTGAAGTAAA TCAAGAATTT
TCATCAATGG AATATGACCT ACAATCACAA ATAGAAAGTG TAAAAACAAG TCATCCTGGA
TATGATGAAT ACATCATAAA CAAAGAAGGA GAAATTAGTC ATAATACTCA TGAACTTTTA
TCCTATATAA CTTCAAGATG TGGAGAAGTA AAATCAGCAT CTGAAGTAAA AGGAATTCTA
AAAGAACTTT TCGATAAGAT GTATAAGCTT GATTTTAAGG AAGAAATTGA AATTAGAACA
AGAACAGTAG CAAGAACTAG ATATGATAGT CGTGGCAATC CTTATACTAG CTATGAAAAA
GAAGAGTACG AATATAAAAA GTTAATTGTA ACTTTAAAGA AAAAAGAAAT GGATGAAGTT
GTTAGGGAAA TATTTAAAGA TTATCCAGAC AATGTAGTTC ATTATGAAGC TCTTCTTGAA
GCTAAGGGAA ATATGGGAGA TGTTTTTGGA TCAGGTAATG GGAACTTAGG AGAAATAGTA
GATAATCCAA ACTTTGGAAA TCCTGGTCTT GCTTTTGATT CAGCTACTGC CAAAGCCTTA
TTTAATGAAG CAGAAAAACA TATAGGCAAA AGATATGTGT TTGGAGCAAG TGGACCATCT
AACTTTGACT GCTCAGGATT TGTATGTTGG TCATTTACAA AGTCTGGTGT AAAGAGAATG
CCAAGAACAA CTGCATGGAG AATATACAAA GACTATTGTA ATCCAGTAAG TCCAAGTGAA
GCTCAACCTG GAGATATTAT ATTTTTCCAC TCAACATATA ACAGTGGAAC ACCAATATCT
CACGTAGGAA TATACGCAGG TAACGGAATG ATGATTCACG CAGGAGATCC AATTCAATAC
ACATCAATAA ATTCAAAATA TTGGAAATCA CACTTTTATG GTTTTGGAAG ACCAAGATAG
 
Protein sequence
MDKKLKKDFQ KKIIRNRDAP EKNLESKLVH SDDYTNKIIK TKDRFGDKIS EKESKLIHEN 
VLSKDQKQDK LKDFQKAKNK ERIRKEVLDN KDKANEVKQT NLEIRTDESF KLDEGLDVDF
KKVNFDSENS KDINSTKLTT YDISAKAQPI SNKKASSRRQ VFKNYEDKII HSKDKFQDKI
NEKESKRIHT SEDKPIESKK SKRIYKKDKL VKDEVSKNDS NSNIDKKQKQ KLYQEKKFRD
KEKISKEIDK ESKLSQVDTD KTFDNSELKD NNLEFIKDEK EASLKLSEQK KVNKKKTYYK
RKNYESDKFT RKKIDNLKNE SKKVTMKDSK KAQDVKDFIS DKKIGELEKS KSKLKDNILN
NKTKGSLSSG VLLSGAKSSE LVRDYLSSGS DNTGVESGEK VANVSSKLQH GIRKYKLDKK
KKSLKKLSKL DKKIRKRKSK LEFKSGLEDL KKSDAYIKKN RFKKFYQRKQ MKSMIAKKHE
TRLVDRVKKA ILSLGKASKE LIIRKSKMVL FLVIGLGLML SIMIGGGSVG MSGLSNSVNS
VMTTTYLSQD TVLSEVNQEF SSMEYDLQSQ IESVKTSHPG YDEYIINKEG EISHNTHELL
SYITSRCGEV KSASEVKGIL KELFDKMYKL DFKEEIEIRT RTVARTRYDS RGNPYTSYEK
EEYEYKKLIV TLKKKEMDEV VREIFKDYPD NVVHYEALLE AKGNMGDVFG SGNGNLGEIV
DNPNFGNPGL AFDSATAKAL FNEAEKHIGK RYVFGASGPS NFDCSGFVCW SFTKSGVKRM
PRTTAWRIYK DYCNPVSPSE AQPGDIIFFH STYNSGTPIS HVGIYAGNGM MIHAGDPIQY
TSINSKYWKS HFYGFGRPR