Gene Apre_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1774 
Symbol 
ID8368689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand
Start bp41373 
End bp43109 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content32% 
IMG OID644984705 
ProductABC transporter related 
Protein accessionYP_003142356 
Protein GI256821157 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.937186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAATG TGTTTAAAAA GATATGGAAT TTTTCAAAAG AAGAACAGGT ATATATTAAG 
AAATCTATTC TCGCTGGATT TTTGCACGCA GTATTTAATG CCCTTGAATT TGGTGCAATT
TACTATATGC TAGTAAATAT ATTTTCTAAA ACTTTAGACT ATAAGGCTAT CTTTGTTTGT
CTTGGAATAT TAGTTATATC CCTTGTTGGA AAGATAATGA CACAAAAATC ATCACAAATG
GCACAAACAC ACGCTGGATA TTTTATGGCA GCTCATAAGA GGATAGAAAT AGGAGAAAAA
ATAAAAAGAG TTCCTATGGG TTTCTTTTCA AGCTTTTCAC TAGGAAGATT AACTACTATT
GCTACATCTT CACTTTCCCA AGCAGAAATG TGGGTGCCTA TGCTTTTGGT TCTTGTACTT
GGTGGAGTTT TAAATACTCT AGTCTTTGTC CTTGGAACTT TAATTTTTAA CGTAAAGGTA
GGACTGGTTG CTGTAGCAGG TGTAATAGTA TTCTTTATAG TTACATCAAT GATGGAGAAA
AAATCATCAG CTAATGCAGA CAAGATGACA GAAACACAAA CAAGACTTAC AAAAGAAGTA
TTAGCAACTT TACAAGGTAT GCAGGTTATA AAATCCTATA ATCTTGGTGG AGAAAATAAC
AGGGCTTTAA GAAAGTCTAT AAAAGATACA TCAAATATAC TTTTAGATTT AGAAATATCT
GTAGCACCAT ACACAGTAAT TCAAAGAATT GTAATGGGAA TAACAACAGT GGCTATGGTC
TATTTATCAT TAAAATTAAA TTTATCTGGT GAACTTCCAC TTGCTGAAAC AATTCTTATG
ATTATGGCAT CCTTTATTAT CTTTGAAGGC TTAATCGGAG CAGGATCAAA CATGGCAATC
CTAAGAGCAT GCGAAAATGC CATAGATTCT GTAGGTTTTA TCGACTCTAT GCCTGATATG
AGAAAAGGAA GTATTACAGA GCCTATAAAA AATCATGATA TAGTCTTTAA AAATGTCAGC
TTTTCTTATG ATGATAGACC AATTTTAAAA AATGTATCAG CAGAGATAAA AGAAAATACT
ATGACTGCCA TAGTTGGTCC ATCTGGATCT GGTAAAACAA CATTTTGTAA TCTAATAGCG
AGATTTTGGG ATGTAAATTC TGGTGAAATT TTAATCGGAG GAAAGAATAT TAAGGACTAT
AAGATAGAAA ACTTAATGAA TTCTATTTCC ATGGTATTTC AAGATGTATA TCTATTTGAG
GATACAATTG AAAATAATAT AAAATTTGGA AAACAAAATG CAAGTCATGA AGAAGTAGTT
CAAGCTGCAA AGAAGGCAAG GTGCCATGAA TTTATAGAAG CTTTACCAGA AGGATATGAC
ACTATTATCG GAGAAGGTGG AGCAAGTCTA TCGGGTGGAG AAAAACAAAG GATCTCCATA
GCTAGAGCCA TGCTAAAAGA TGCGGACATC ATAATCTTTG ATGAAGCCAC AGCAAGTATA
GATCCAGAAA ATGAAGATAA GCTTAAAGAA GCAATAGAAT CATTAACAAA AAACAAAACA
GTAATTATGA TTGCCCACAG ACTAAAGACA ATTAGAAATG CTGACCAGAT TTTAGTCTTA
AAAGATGGAG AAATAGTAGA ACGTGGAAAT CACGAAGAAC TGATTAAAAA TAATGGACTT
TATTCTGACC TTATAAATGC AAAAGCTAAG GCGGAATCAT GGAAATTAAA TAATTGA
 
Protein sequence
MLNVFKKIWN FSKEEQVYIK KSILAGFLHA VFNALEFGAI YYMLVNIFSK TLDYKAIFVC 
LGILVISLVG KIMTQKSSQM AQTHAGYFMA AHKRIEIGEK IKRVPMGFFS SFSLGRLTTI
ATSSLSQAEM WVPMLLVLVL GGVLNTLVFV LGTLIFNVKV GLVAVAGVIV FFIVTSMMEK
KSSANADKMT ETQTRLTKEV LATLQGMQVI KSYNLGGENN RALRKSIKDT SNILLDLEIS
VAPYTVIQRI VMGITTVAMV YLSLKLNLSG ELPLAETILM IMASFIIFEG LIGAGSNMAI
LRACENAIDS VGFIDSMPDM RKGSITEPIK NHDIVFKNVS FSYDDRPILK NVSAEIKENT
MTAIVGPSGS GKTTFCNLIA RFWDVNSGEI LIGGKNIKDY KIENLMNSIS MVFQDVYLFE
DTIENNIKFG KQNASHEEVV QAAKKARCHE FIEALPEGYD TIIGEGGASL SGGEKQRISI
ARAMLKDADI IIFDEATASI DPENEDKLKE AIESLTKNKT VIMIAHRLKT IRNADQILVL
KDGEIVERGN HEELIKNNGL YSDLINAKAK AESWKLNN