Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1771 |
Symbol | |
ID | 8368686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013164 |
Strand | + |
Start bp | 37259 |
End bp | 38902 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644984702 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003142353 |
Protein GI | 256821154 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAC TTAGAAAAAA TATGATGGTT TTATTGGCAC TTGTATTTAG TTTTTCAATT TTACTAGGAG GTTGCCAAAA GAATCAAGAA AAAGCACAAG AAAATTCAAA TGTAGCAAGT GAGAACACAA AAGATGAAAG CAAGAAGGTT TTAACCTTAT GTACTGCTAA AGAACTGACA AACCTTACGA CTTTAACAAT GAATAAGGAA AATAATATGG CTTGTGGTTT AATTTACGAA ACCCTAGTAG CTTATGAAAA CGGTGAAATT GTACCAAAAC TTGCTGAAAG CTTTGAATAT AAAGATGATG GCAAAACTTT AGTCTTTAAA TTAAAGGACG GGGTAAAGTT TTCAGATGGT GAAGATTTTA ATGCTGATGC AGTAAAAAAG ATATTAGATT TTGATAAGTC TAACCCTAAT TTTGCAGGCA TAAGGGCTGT TGCAGAGATA AAATCAACAG AAGTTATTGA TGATAATACG ATTGCTGTTC ACTATGAAAA TCCGTCTAAA TTTTATATAA ATGGCTTTTG TTTCCAAAAT GTATTGGGGA TGCCATCTCC AAAGTCATTT ACTGAGGGAA ACTTTGAGAA ATTTAACAAA AATATAGGAA CAGGTCCTTA TGTATATGAA GAATTTAAAT CTGGAGAATA TACAAAATTT GTTAGAAATG AAAATTATCA TGGGGAAAAA CCTTATTATG ATGAAGTTAT TGTCAAATAT ATTCCCGATG CTTCCTCAAG ACTTCAAGCC TTAAATAAGG GGGAAATAGA TTTAATTTAT GGAGCAGATT TAATAAATTA TGATGACTTC AAAAAAGGTT CTGAAATTAA GGATGTTACT GGAGAAGTCA ACAAAAATAG GACTTTGACT AAGAATCTAA TTTTAAATCC AAGTAAAAAA GAATTAGAAG ATTTAAGAGT TCGCCAAGCA ATTAATTATG CAATTAACAA AAAAGACATT GTCGACAGTT TAACATACTC ATATGAAGAT GTAGCTGAAA CTTTATTCCC TAAAGATGTA GCTTATTGTG ATGCAAATTA TCCAACTAAT TATAGTTATG CTCCTGAAAA GGCAAATAGC TTGCTAGATG AAGCGGGTTG GAAACTCAAT AAAGATACAG GAATTAGAGA AAAGGACGGA AGTCCATTAA AGCTTCAATA TGTTTACTGG TCAGATTTAG TACTTGCTAA GGAAACTGCA CTTGCAATAA AGACACAATT AAAAGAAGTA GGTATAGATG TTGACCTAGT TGAAAAAGAT CAAATGTCAT GGTGGACAGA TGGTATAAAG GGAGAATTCC ATTTGACAAC CTGGAATACA GAGGGTTCTT ATACTGAACC TCATAAGTTC TTACAAGAAT CAATCACCGA AATGGATCCA CATTTGATGC CGTTAAAAGC ACTTTCTGAT TCAAACATAT ATATTGATGC AATAAAGAAA GCTTCCACTT CTACAAATGA AGGGGAGATT AAAGATAATA TACAAAAAGC TATAGTATAT TCAAACGAAA ACGCTATGGA TTTGCCTCTT TCTTATTCAA AAGAAATGAT TTTGTATAGA AATGACAAAA TTGGTGGATA TGACTTTACA AGTACACCTC AATTTTTCAA TATTTACAGT GTAAAAGCTA AGACAAGTAA ATAA
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Protein sequence | MIKLRKNMMV LLALVFSFSI LLGGCQKNQE KAQENSNVAS ENTKDESKKV LTLCTAKELT NLTTLTMNKE NNMACGLIYE TLVAYENGEI VPKLAESFEY KDDGKTLVFK LKDGVKFSDG EDFNADAVKK ILDFDKSNPN FAGIRAVAEI KSTEVIDDNT IAVHYENPSK FYINGFCFQN VLGMPSPKSF TEGNFEKFNK NIGTGPYVYE EFKSGEYTKF VRNENYHGEK PYYDEVIVKY IPDASSRLQA LNKGEIDLIY GADLINYDDF KKGSEIKDVT GEVNKNRTLT KNLILNPSKK ELEDLRVRQA INYAINKKDI VDSLTYSYED VAETLFPKDV AYCDANYPTN YSYAPEKANS LLDEAGWKLN KDTGIREKDG SPLKLQYVYW SDLVLAKETA LAIKTQLKEV GIDVDLVEKD QMSWWTDGIK GEFHLTTWNT EGSYTEPHKF LQESITEMDP HLMPLKALSD SNIYIDAIKK ASTSTNEGEI KDNIQKAIVY SNENAMDLPL SYSKEMILYR NDKIGGYDFT STPQFFNIYS VKAKTSK
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