Gene Apre_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1770 
Symbol 
ID8368685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand
Start bp36552 
End bp37256 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content30% 
IMG OID644984701 
ProductABC transporter related 
Protein accessionYP_003142352 
Protein GI256821153 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.529989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA TAGCTATGAG TAATGTTAGC CTTTCTTTTG AAACAGTAAA AGGGACATTT 
AAAGCTCTAG ATCAAATTTC CTTTTCACTA AAAAGGGGAG ATAACTTAAG TTTAATTGGT
GAAAGTGGAT CTGGTAAAAG CACCATTGCA AAAGCATTAA TAGGATTAGA AAGAATAGAT
GAAGGATCTA TACTCTATGA TTCTGTAGAT ATCTCAAAAT TAAAATTAAA AAAAATAAGG
AAATATAGAA AAAATATCCA GTCTGTTTTC CAGGATACAT CTGGTACTTT AAATCCTGGT
ATAAGCACTT TTAAAAATTT GGAAGAAGGG CTTATTAATT TAACAAACTT GTCGAAAAAG
GAAAGAAAGG AAAAAGTGTT ATTATTTTGC GAGGATTTAC ATTTAAAAAA GGAAATATTA
GATGTGCCCG TTCACCAACT ATCTGGAGGC GAGCAAAGAA GATTGTCGCT CATAAGAGCC
CTTATGGTTA ATCCTGATTT TTTAATACTA GATGAGGTTA CGGCTGGGCT TGACTTACTG
ACGATTGAAA AAGTATTAAA CTTACTTTTT TATTATCAAT CTAAGCATAG TATTTCTTAT
ATTTTTATCA CTCATGATAT AAATCAAGCA AAACAGATTT CAGATTATAT CATAGAAATA
AAGAAAGGAA AAATATTTAG AGAAGGAAAA TTGCAAAGGA GATAG
 
Protein sequence
MDEIAMSNVS LSFETVKGTF KALDQISFSL KRGDNLSLIG ESGSGKSTIA KALIGLERID 
EGSILYDSVD ISKLKLKKIR KYRKNIQSVF QDTSGTLNPG ISTFKNLEEG LINLTNLSKK
ERKEKVLLFC EDLHLKKEIL DVPVHQLSGG EQRRLSLIRA LMVNPDFLIL DEVTAGLDLL
TIEKVLNLLF YYQSKHSISY IFITHDINQA KQISDYIIEI KKGKIFREGK LQRR