Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1770 |
Symbol | |
ID | 8368685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013164 |
Strand | + |
Start bp | 36552 |
End bp | 37256 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 644984701 |
Product | ABC transporter related |
Protein accession | YP_003142352 |
Protein GI | 256821153 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.529989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAA TAGCTATGAG TAATGTTAGC CTTTCTTTTG AAACAGTAAA AGGGACATTT AAAGCTCTAG ATCAAATTTC CTTTTCACTA AAAAGGGGAG ATAACTTAAG TTTAATTGGT GAAAGTGGAT CTGGTAAAAG CACCATTGCA AAAGCATTAA TAGGATTAGA AAGAATAGAT GAAGGATCTA TACTCTATGA TTCTGTAGAT ATCTCAAAAT TAAAATTAAA AAAAATAAGG AAATATAGAA AAAATATCCA GTCTGTTTTC CAGGATACAT CTGGTACTTT AAATCCTGGT ATAAGCACTT TTAAAAATTT GGAAGAAGGG CTTATTAATT TAACAAACTT GTCGAAAAAG GAAAGAAAGG AAAAAGTGTT ATTATTTTGC GAGGATTTAC ATTTAAAAAA GGAAATATTA GATGTGCCCG TTCACCAACT ATCTGGAGGC GAGCAAAGAA GATTGTCGCT CATAAGAGCC CTTATGGTTA ATCCTGATTT TTTAATACTA GATGAGGTTA CGGCTGGGCT TGACTTACTG ACGATTGAAA AAGTATTAAA CTTACTTTTT TATTATCAAT CTAAGCATAG TATTTCTTAT ATTTTTATCA CTCATGATAT AAATCAAGCA AAACAGATTT CAGATTATAT CATAGAAATA AAGAAAGGAA AAATATTTAG AGAAGGAAAA TTGCAAAGGA GATAG
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Protein sequence | MDEIAMSNVS LSFETVKGTF KALDQISFSL KRGDNLSLIG ESGSGKSTIA KALIGLERID EGSILYDSVD ISKLKLKKIR KYRKNIQSVF QDTSGTLNPG ISTFKNLEEG LINLTNLSKK ERKEKVLLFC EDLHLKKEIL DVPVHQLSGG EQRRLSLIRA LMVNPDFLIL DEVTAGLDLL TIEKVLNLLF YYQSKHSISY IFITHDINQA KQISDYIIEI KKGKIFREGK LQRR
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