Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1745 |
Symbol | |
ID | 8368661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013164 |
Strand | + |
Start bp | 7250 |
End bp | 8866 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 644984677 |
Product | ABC transporter related |
Protein accession | YP_003142328 |
Protein GI | 256821129 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000253121 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA CTTTCAAAAG GATTATTAAG CCGTTTTTAA CAAAATTTAT TATACTTTCT ATAATAATAA TAATATCTAA TACATCAATT ATTCTAGTTC CATATTATAA TGGCAAATTT ATTGATTCTT TAGTTACTTT AGAAAGTATA GATAATATTA AAAAATATGC TTTTTTAGTG ATAGCTTTTT CACTTTTAAA TGCAATTACG GCAATTTCAA GTGAATATAT ACAATTAACT TTATCCGAAC AAATTAAATT TATAAATAAG TTTAATATAA TAGATAAATT AAGGAAAATA CCTTTTTTAA AATTCAAAGA ATTTGATCCA GTATATTTAT ATCAAAGAAT AGAACAGGAT AGTGCAACTA TTGTTGATTT TGTCTTACAA AACATTGTTT TAATATTTAT TTATGGAGTT AAACTAATAG TAGTATTCTA TATTTTATTA AAAATAAATG TTTATATTGC TGGATTTGTA GGTATATTAA TGCCTATATA TTTATTTGTA TATTCAAAAT TTAGAGAGCC ATTAAGAAAT AAAAGTTTTA TTGTTAGAGA GACTCAAAAT GAATACTATA AAGATATGAA TCAGCAATTG GAGTATATGT ATGTAATTAA GTTAAATGCT AAATATAATG ATGAAAATAC GTTTTTGAGA AAATCATTTA ATAGATTTAT TGGTGTATAT AAAGAATATG CAAGGATGCT AATGATTTTT AATTTTTCTC AAGGTGGCAT TTCTTTTATA TTTCAAACAC TAACATTAGT TTTAGGTGGA TACTATGTTA TAAATAAGGA TATGACTATA GGAGAATTAG CCGTAATTGG AAATTATTAT GGGATAATTG AATCCATTAT AAAATATTAC TACACATTGG GGAAAGATTA TCAAAATTTC ATAGTTGCAA ATAAAAGAAA TTCTGAATTA CTAAAAATAT CTAATGATGA GATTGGGAAC ATAAAAATCA ATGTTATAAC ACATTTATCA GCAAATCTAA CATATAAATA TAACGAAAAA AAAATAGTAT TGGATAAAAA AGAAATAGAA TTGTCATTAG GAGATATATT GTTAATAAGG GGAGAGAATG GCAAGGGGAA AACTACTATA ATTCAATTAA TTAATGGAAT ATTGCGAGGT AAGGATGTAG ATATAAGATA TAATGATATA GATATTGATA AGATAAATTT AGAATATATG AGAGAAAAGG CAATTTCAAA TGTTCCCCAA GACATTACTA TTAAAAATAT ATCTGTACTT GAATTTTTGG AAGTAAATAT GGAAAATATG AATAATGATT TTGATAATAT AAAGAAAAAA CTTTTATATA AAGGATCTGA TGAAGATAGA TACATGATAG ATTTTTTGTT GGAAAATTTA CACAAGAGTA TTAGCGAATT ATCTGGTGGT GATAAGCAGT TTCTATATAT ATTAAAAGAA TTATCTCAAG ATAAAAGTAT GTTAGTTTTA GATGAACCCT CTTCTAATTT AGATTACATG AGAATTGAGT GGTTGAAAAA ATATATTAAT AATGTTAGAG ATAAAAAAAT AATAATTATT ATAACACATG ATGATAGATT GAATTTTAGC AATAGTAAAA TATTAAATTT AGATTAA
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Protein sequence | MIKTFKRIIK PFLTKFIILS IIIIISNTSI ILVPYYNGKF IDSLVTLESI DNIKKYAFLV IAFSLLNAIT AISSEYIQLT LSEQIKFINK FNIIDKLRKI PFLKFKEFDP VYLYQRIEQD SATIVDFVLQ NIVLIFIYGV KLIVVFYILL KINVYIAGFV GILMPIYLFV YSKFREPLRN KSFIVRETQN EYYKDMNQQL EYMYVIKLNA KYNDENTFLR KSFNRFIGVY KEYARMLMIF NFSQGGISFI FQTLTLVLGG YYVINKDMTI GELAVIGNYY GIIESIIKYY YTLGKDYQNF IVANKRNSEL LKISNDEIGN IKINVITHLS ANLTYKYNEK KIVLDKKEIE LSLGDILLIR GENGKGKTTI IQLINGILRG KDVDIRYNDI DIDKINLEYM REKAISNVPQ DITIKNISVL EFLEVNMENM NNDFDNIKKK LLYKGSDEDR YMIDFLLENL HKSISELSGG DKQFLYILKE LSQDKSMLVL DEPSSNLDYM RIEWLKKYIN NVRDKKIIII ITHDDRLNFS NSKILNLD
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