Gene Apre_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1745 
Symbol 
ID8368661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013164 
Strand
Start bp7250 
End bp8866 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content22% 
IMG OID644984677 
ProductABC transporter related 
Protein accessionYP_003142328 
Protein GI256821129 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000253121 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA CTTTCAAAAG GATTATTAAG CCGTTTTTAA CAAAATTTAT TATACTTTCT 
ATAATAATAA TAATATCTAA TACATCAATT ATTCTAGTTC CATATTATAA TGGCAAATTT
ATTGATTCTT TAGTTACTTT AGAAAGTATA GATAATATTA AAAAATATGC TTTTTTAGTG
ATAGCTTTTT CACTTTTAAA TGCAATTACG GCAATTTCAA GTGAATATAT ACAATTAACT
TTATCCGAAC AAATTAAATT TATAAATAAG TTTAATATAA TAGATAAATT AAGGAAAATA
CCTTTTTTAA AATTCAAAGA ATTTGATCCA GTATATTTAT ATCAAAGAAT AGAACAGGAT
AGTGCAACTA TTGTTGATTT TGTCTTACAA AACATTGTTT TAATATTTAT TTATGGAGTT
AAACTAATAG TAGTATTCTA TATTTTATTA AAAATAAATG TTTATATTGC TGGATTTGTA
GGTATATTAA TGCCTATATA TTTATTTGTA TATTCAAAAT TTAGAGAGCC ATTAAGAAAT
AAAAGTTTTA TTGTTAGAGA GACTCAAAAT GAATACTATA AAGATATGAA TCAGCAATTG
GAGTATATGT ATGTAATTAA GTTAAATGCT AAATATAATG ATGAAAATAC GTTTTTGAGA
AAATCATTTA ATAGATTTAT TGGTGTATAT AAAGAATATG CAAGGATGCT AATGATTTTT
AATTTTTCTC AAGGTGGCAT TTCTTTTATA TTTCAAACAC TAACATTAGT TTTAGGTGGA
TACTATGTTA TAAATAAGGA TATGACTATA GGAGAATTAG CCGTAATTGG AAATTATTAT
GGGATAATTG AATCCATTAT AAAATATTAC TACACATTGG GGAAAGATTA TCAAAATTTC
ATAGTTGCAA ATAAAAGAAA TTCTGAATTA CTAAAAATAT CTAATGATGA GATTGGGAAC
ATAAAAATCA ATGTTATAAC ACATTTATCA GCAAATCTAA CATATAAATA TAACGAAAAA
AAAATAGTAT TGGATAAAAA AGAAATAGAA TTGTCATTAG GAGATATATT GTTAATAAGG
GGAGAGAATG GCAAGGGGAA AACTACTATA ATTCAATTAA TTAATGGAAT ATTGCGAGGT
AAGGATGTAG ATATAAGATA TAATGATATA GATATTGATA AGATAAATTT AGAATATATG
AGAGAAAAGG CAATTTCAAA TGTTCCCCAA GACATTACTA TTAAAAATAT ATCTGTACTT
GAATTTTTGG AAGTAAATAT GGAAAATATG AATAATGATT TTGATAATAT AAAGAAAAAA
CTTTTATATA AAGGATCTGA TGAAGATAGA TACATGATAG ATTTTTTGTT GGAAAATTTA
CACAAGAGTA TTAGCGAATT ATCTGGTGGT GATAAGCAGT TTCTATATAT ATTAAAAGAA
TTATCTCAAG ATAAAAGTAT GTTAGTTTTA GATGAACCCT CTTCTAATTT AGATTACATG
AGAATTGAGT GGTTGAAAAA ATATATTAAT AATGTTAGAG ATAAAAAAAT AATAATTATT
ATAACACATG ATGATAGATT GAATTTTAGC AATAGTAAAA TATTAAATTT AGATTAA
 
Protein sequence
MIKTFKRIIK PFLTKFIILS IIIIISNTSI ILVPYYNGKF IDSLVTLESI DNIKKYAFLV 
IAFSLLNAIT AISSEYIQLT LSEQIKFINK FNIIDKLRKI PFLKFKEFDP VYLYQRIEQD
SATIVDFVLQ NIVLIFIYGV KLIVVFYILL KINVYIAGFV GILMPIYLFV YSKFREPLRN
KSFIVRETQN EYYKDMNQQL EYMYVIKLNA KYNDENTFLR KSFNRFIGVY KEYARMLMIF
NFSQGGISFI FQTLTLVLGG YYVINKDMTI GELAVIGNYY GIIESIIKYY YTLGKDYQNF
IVANKRNSEL LKISNDEIGN IKINVITHLS ANLTYKYNEK KIVLDKKEIE LSLGDILLIR
GENGKGKTTI IQLINGILRG KDVDIRYNDI DIDKINLEYM REKAISNVPQ DITIKNISVL
EFLEVNMENM NNDFDNIKKK LLYKGSDEDR YMIDFLLENL HKSISELSGG DKQFLYILKE
LSQDKSMLVL DEPSSNLDYM RIEWLKKYIN NVRDKKIIII ITHDDRLNFS NSKILNLD