| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2187 |
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| Symbol | |
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| ID | 8368648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2606711 |
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| End bp | 2607721 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644984641 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003142292 |
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| Protein GI | 256821013 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATATC TATTTTTAAG TATCACAATA GGTTTAGTAG CTTGCCAGTC TTCCGTAAAA
GATGAAATTC ATCTTATAAG TGGGGAAGCG CAAGGTAGTA CTTACCACAT TAAGTACATT
AGCAAAACTA AAGAAGACTT AAAACCCGCC ATAGACTCTA TTTTACAAGT GATAGATAAG
TCTATGTCTA CCTATAAAAC AGATTCTGAC ATTTCTAAAA TCAATGCAGG GGATAAAAAT
GTAGTGGTAG ACGAACATTT CAGAAAGGTT TTTGAAGCCT CTCAGCAAAT ATGGCAAGAA
AGTGAAGGTT TGTTTGACCC TACGGTAGGT GTATTAGTAA ATGCTTGGGG GTTCGGTAAA
CAAAAGATAA CTGAGGATAA ACTCCCCACA GATGAAAGAA TAGCAGAACT AAAAAAATAT
GTAGGCTTTA ATAAAGTACA TCTCACAGCC GATAACCATA TTGAAAAAGA GTCTCCTGAA
ATACTGTTTG ACTTTAATGC CATAGCACAA GGCTATACCT CCGATGTAGT TGCGGCTTTT
CTCAGCTCAA AAGGTATTGA GAATTATATA GTAGAGATAG CAGGTGAGAT GTATCTGAAA
GGAAGGAACA TCATAGAGAA CAAAGCGTGG ACGATAGGCG TAGAAAACCC TATCAAACCT
TTGGACGACC GCGAATTGGT AGCTACTATA CAATTTACCA ATCAAGGATT GGCAACCTCT
GGTAACTATC GCAAAGTATG GACAGATAGT AATGGGCGCA AATATGTACA TTCTATTAAC
CCTATTACCG GACGCGCTAC CCAAAGCGAT GTGCTCAGTG CTACAGTAGT TGCTCCTTCC
ACTATGTTTG CTGATGGATA TGCCACTATG TTTATGGTAA TGGGATTGGA AAAGAGCAAA
GATTTCTTAG AGAAACACCC CAATATGGCT GTACTTTTAG TGTATAGTAA CGAACAAAAC
GAAGAACTTA CCTTTAAGAC GAAGGCTTTT GAAAAATTAA TAATTCAGTA A
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| Protein sequence | MKYLFLSITI GLVACQSSVK DEIHLISGEA QGSTYHIKYI SKTKEDLKPA IDSILQVIDK
SMSTYKTDSD ISKINAGDKN VVVDEHFRKV FEASQQIWQE SEGLFDPTVG VLVNAWGFGK
QKITEDKLPT DERIAELKKY VGFNKVHLTA DNHIEKESPE ILFDFNAIAQ GYTSDVVAAF
LSSKGIENYI VEIAGEMYLK GRNIIENKAW TIGVENPIKP LDDRELVATI QFTNQGLATS
GNYRKVWTDS NGRKYVHSIN PITGRATQSD VLSATVVAPS TMFADGYATM FMVMGLEKSK
DFLEKHPNMA VLLVYSNEQN EELTFKTKAF EKLIIQ
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