Gene Coch_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2174 
Symbol 
ID8368635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp2590110 
End bp2590730 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content34% 
IMG OID644984628 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003142279 
Protein GI256821000 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGA TGAAAGAAGA TATTGTAAAA CGTGCCTTAA ACGACTTTAT GCAGTATGGG 
TTTAAAACCT TTACTATGGA TGATTTGGCT AACAAAATGG GGATGTCTAA AAAGACGCTT 
TACGAGTATT TTCCCTCTAA ACAAGATTTA GTAGATGCTT GTTTAGATTA TGCCTTAGAA 
ATGAGTTGTA CAAATGTAAC TACTTTTGTA CAAGGGGAAG GTTCAGTGAT AGAAAATGTA 
TACCGCAACC AAAAAAAGGT TCAAGAAGTT TTTAACATCA ATAGCGACCG TCCTATTTGG 
GAATTGCAAA AGTACTATCC TAAAACATAC GAACGTATGA AAAGTGAGTT CGCTAAAACT 
GATGGACTTT TTATAGATAA ACTCTTAGAA AAAGGTTGGC AAGAAGGTCT TTTTAGAAAA 
GATATCAATG TGAACTTCTG TAAGGTTTTC TATACTAGTG TACAACGTCT CCGTTCTATA 
ACTCATACTT TCCCTGAAAG AGAATTTCCC TTCTGGGAAA CTATCTATAC TATTTTAGAG 
TACTTTTTTA GGATACTTGT CAATGAAAAA GGGCTAAAAG AATTGGAACG AGTGCTTAAG 
GAGGTAAAAG ATAAAAGGTA A
 
Protein sequence
MREMKEDIVK RALNDFMQYG FKTFTMDDLA NKMGMSKKTL YEYFPSKQDL VDACLDYALE 
MSCTNVTTFV QGEGSVIENV YRNQKKVQEV FNINSDRPIW ELQKYYPKTY ERMKSEFAKT 
DGLFIDKLLE KGWQEGLFRK DINVNFCKVF YTSVQRLRSI THTFPEREFP FWETIYTILE 
YFFRILVNEK GLKELERVLK EVKDKR